ggKbase home page

13_1_20cm_2_scaffold_5523

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_5523_1
unknown

Not on your lists

2..367
DNA (366bp) protein (122aa)

This feature has no annotations

13_1_20cm_2_scaffold_5523_2

Not on your lists

604..2355
DNA (1752bp) protein (584aa)
Peptidase U62, modulator of DNA gyrase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01UA4_SOLUE
Uncharacterized protein {ECO:0000313|EMBL:KKN60624.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
peptidase U62, modulator of DNA gyrase
13_1_20cm_2_scaffold_5523_3

Not on your lists

2352..4187
DNA (1836bp) protein (612aa)
Peptidase U62, modulator of DNA gyrase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01UA3_SOLUE
Uncharacterized protein {ECO:0000313|EMBL:KKN60623.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
peptidase U62, modulator of DNA gyrase
13_1_20cm_2_scaffold_5523_4
Sideroxydans lithotrophicus, Sideroxydans, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4208..4792
DNA (585bp) protein (195aa)
Peptide methionine sulfoxide reductase MsrB {ECO:0000256|HAMAP-Rule:MF_01400}; EC=1.8.4.12 {ECO:0000256|HAMAP-Rule:MF_01400};; Peptide-methionine (R)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01400
methionine-R-sulfoxide reductase (EC:1.8.4.12)
Peptide methionine sulfoxide reductase MsrB n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CPJ9_SIDLE
13_1_20cm_2_scaffold_5523_5
RBG_16_Chloroflexi_57_9_curated, Chloroflexi, Bacteria

Not on your lists

4908..5609
DNA (702bp) protein (234aa)
Cation diffusion facilitator family transporter n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TEE1_9CHLR
cation diffusion facilitator family transporter Tax=RBG_16_Chloroflexi_57_9_curated
cation diffusion facilitator family transporter
13_1_20cm_2_scaffold_5523_6
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

5554..6264
DNA (711bp) protein (237aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003772EC3
cation diffusion facilitator family transporter Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
cation diffusion facilitator family transporter
13_1_20cm_2_scaffold_5523_7
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(6286..7740)
DNA (1455bp) protein (485aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IUP9_KORVE
Uncharacterized protein {ECO:0000313|EMBL:ABF39401.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strai
hypothetical protein
13_1_20cm_2_scaffold_5523_8
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7842..11231
DNA (3390bp) protein (1130aa)
polysaccharide deacetylase n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00035D624B
Polysaccharide deacetylase {ECO:0000313|EMBL:CDI03075.1}; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Compe
polysaccharide deacetylase
13_1_20cm_2_scaffold_5523_9
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

11284..13527
DNA (2244bp) protein (748aa)
aldehyde dehydrogenase (EC:1.2.99.3)
Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DN80_SINAD alias=16ft_combo_ws3_scaffold_2718_23 id=5224646 tax=16ft_combo_ws3 species=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
13_1_20cm_2_scaffold_5523_10
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

13600..14079
DNA (480bp) protein (160aa)
(2Fe-2S)-binding domain protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01S40_SOLUE
aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
(2Fe-2S)-binding protein
13_1_20cm_2_scaffold_5523_11
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

14127..14693
DNA (567bp) protein (189aa)
isoquinoline 1-oxidoreductase (EC:1.3.99.16)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000376A363
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
Displaying 11 items

View Taxonomy