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13_1_20cm_2_scaffold_2335

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_2335_1
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(3..671)
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=Streptomyces sp. FxanaD5 RepID=UPI00036979D2
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
hypothetical protein
13_1_20cm_2_scaffold_2335_2
unknown

Not on your lists

comp(673..966)
DNA (294bp) protein (98aa)

This feature has no annotations

13_1_20cm_2_scaffold_2335_3
unknown

Not on your lists

comp(997..1233)
DNA (237bp) protein (79aa)

This feature has no annotations

13_1_20cm_2_scaffold_2335_4
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(1292..1663)
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI00036EF67E
Globin {ECO:0000313|EMBL:ABJ88703.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin60
globin
13_1_20cm_2_scaffold_2335_5
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1660..2706)
DNA (1047bp) protein (349aa)
Amidohydrolase family protein n=1 Tax=Mycobacterium avium (strain 104) RepID=A0QGE7_MYCA1
putative amidohydrolase Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase
13_1_20cm_2_scaffold_2335_6
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2796..3878
DNA (1083bp) protein (361aa)
serA; D-3-phosphoglycerate dehydrogenase; K00058 D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95] Tax=GWD2_Deltaproteobacteria_55_8_curated
Predicted dehydrogenase related to phosphoglycerate dehydrogenase n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=Q8TYK0_METKA
D-3-phosphoglycerate dehydrogenase
13_1_20cm_2_scaffold_2335_7
unknown

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4254..4748
DNA (495bp) protein (165aa)

This feature has no annotations

13_1_20cm_2_scaffold_2335_8
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(5333..5806)
DNA (474bp) protein (158aa)
hypothetical protein Tax=CSP1_6_Rokubacteria
13_1_20cm_2_scaffold_2335_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

5976..6548
DNA (573bp) protein (191aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
13_1_20cm_2_scaffold_2335_10
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(6573..7559)
DNA (987bp) protein (329aa)
NADPH:quinone reductase (EC:1.6.5.5)
NADPH:quinone reductase n=1 Tax=Oscillatoria nigro-viridis PCC 7112 RepID=K9VC82_9CYAN rbh
Alcohol dehydrogenase {ECO:0000313|EMBL:KIF37921.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
13_1_20cm_2_scaffold_2335_11
unknown

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comp(7607..7915)
DNA (309bp) protein (103aa)

This feature has no annotations

13_1_20cm_2_scaffold_2335_12
unknown

Not on your lists

comp(8114..8440)
DNA (327bp) protein (109aa)

This feature has no annotations

13_1_20cm_2_scaffold_2335_13
unknown

Not on your lists

8653..8943
DNA (291bp) protein (97aa)

This feature has no annotations

13_1_20cm_2_scaffold_2335_14
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(8985..9368)
DNA (384bp) protein (128aa)
GAF sensor hybrid histidine kinase (EC:2.7.13.3) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
CheY-like receiver, AAA-type ATPase and DNA-binding domain-containing response regulator n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PFR1_DESSD
CheY-like receiver, AAA-type ATPase and DNA-binding domain-containing response regulator
13_1_20cm_2_scaffold_2335_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9509..10003
DNA (495bp) protein (165aa)
Cupin region n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IVF3_RHOP2
cupin region Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
cupin region
13_1_20cm_2_scaffold_2335_16
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10007..10219)
DNA (213bp) protein (71aa)
Dodecin n=1 Tax=Nitrosospira sp. APG3 RepID=M5DG69_9PROT
Dodecin {ECO:0000313|EMBL:CCU61193.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein
13_1_20cm_2_scaffold_2335_17
unknown

Not on your lists

comp(10363..10578)
DNA (216bp) protein (72aa)

This feature has no annotations

13_1_20cm_2_scaffold_2335_18
Zea mays, Zea, Poales, commelinids, Streptophyta, Viridiplantae

Not on your lists

comp(10686..11549)
DNA (864bp) protein (288aa)
Lysine-rich arabinogalactan protein 19 n=1 Tax=Arabidopsis thaliana RepID=AGP19_ARATH
Uncharacterized protein {ECO:0000313|EnsemblPlants:GRMZM5G883759_P01}; TaxID=4577 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida;
Fe-S oxidoreductase
13_1_20cm_2_scaffold_2335_19
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(11549..13189)
DNA (1641bp) protein (547aa)
General secretion pathway protein A n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKT1_9BACT
General secretion pathway protein A {ECO:0000313|EMBL:CBE67730.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;
exeA; General secretion pathway protein A
13_1_20cm_2_scaffold_2335_20
unknown

Not on your lists

13327..13575
DNA (249bp) protein (83aa)

This feature has no annotations

13_1_20cm_2_scaffold_2335_21
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13597..14400)
DNA (804bp) protein (268aa)
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TVD4_9CHLR
sensor histidine kinase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
putative two-component sensor histidine kinase protein
13_1_20cm_2_scaffold_2335_22
RBG_19FT_COMBO_Syntrophobacterales_59_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14486..15244)
DNA (759bp) protein (253aa)
Short-chain dehydrogenase n=1 Tax=Oceanibaculum indicum P24 RepID=K2JMB8_9PROT
short-chain alcohol dehydrogenase Tax=RBG_19FT_COMBO_Syntrophobacterales_59_10_curated
short-chain dehydrogenase
13_1_20cm_2_scaffold_2335_23
unknown

Not on your lists

comp(15276..15401)
DNA (126bp) protein (42aa)

This feature has no annotations

13_1_20cm_2_scaffold_2335_24
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

15478..17427
DNA (1950bp) protein (650aa)
putative aldehyde ferredoxin oxidoreductase; K03738 aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5] Tax=GWA2_Rokubacteria_73_35_curated
Putative aldehyde ferredoxin oxidoreductase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I4W2_CALAS
putative aldehyde ferredoxin oxidoreductase
13_1_20cm_2_scaffold_2335_25
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

17622..17999
DNA (378bp) protein (126aa)
Putative uncharacterized protein n=1 Tax=Methyloversatilis universalis FAM5 RepID=F5REF6_9RHOO
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein
13_1_20cm_2_scaffold_2335_26
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

17996..18589
DNA (594bp) protein (198aa)
Putative membrane protein n=3 Tax=Burkholderia cenocepacia RepID=B4EKF7_BURCJ
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_1_20cm_2_scaffold_2335_27
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(18602..19294)
DNA (693bp) protein (231aa)
Response regulator in two-component regulatory system with KdpD, regulation of potassium translocation (OmpR family) n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJR4_9BACT
kdpE; response regulator in two-component regulatory system with KdpD, regulation of potassium translocation (OmpR family) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
kdpE; response regulator in two-component regulatory system with KdpD, regulation of potassium translocation (OmpR family)
13_1_20cm_2_scaffold_2335_28
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(19287..20504)
DNA (1218bp) protein (406aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidat
kdpD; sensory histidine kinase in two-component regulatory system wtih KdpE, regulation of potassium translocation (EC:2.7.1.-)
Sensory histidine kinase in two-component regulatory system wtih KdpE, regulation of potassium translocation n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJR3_9BACT
Displaying 28 items

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