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13_1_20cm_2_scaffold_267

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_267_1
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

170..439
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JAI3_ANAD2
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
hypothetical protein
13_1_20cm_2_scaffold_267_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

453..2624
DNA (2172bp) protein (724aa)
uvrD; DNA helicase II (EC:3.6.1.-) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
uvrD; DNA helicase II (EC:3.6.1.-)
DNA helicase II n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLK9_9BACT rbh
13_1_20cm_2_scaffold_267_3
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

2624..2911
DNA (288bp) protein (96aa)
gatC; glutamyl-tRNA(Gln) amidotransferase subunit C (EC:6.3.5.-) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
gatC; glutamyl-tRNA(Gln) amidotransferase subunit C (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLK8_9BACT
13_1_20cm_2_scaffold_267_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2901..4376
DNA (1476bp) protein (492aa)
gatA; glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADT subunit A) (EC:6.3.5.-) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
gatA; glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADT subunit A) (EC:6.3.5.-)
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLK7_9BACT
13_1_20cm_2_scaffold_267_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

4373..5845
DNA (1473bp) protein (491aa)
gatB; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (Asp/Glu-ADT subunit B) (EC:6.3.5.-) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
gatB; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (Asp/Glu-ADT subunit B) (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLK4_9BACT rbh
13_1_20cm_2_scaffold_267_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5876..6547
DNA (672bp) protein (224aa)
Cell division ATP-binding protein FtsE n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HT01_9FIRM
cell division ATP-binding protein FtsE; K09812 cell division transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
cell division ATP-binding protein FtsE
13_1_20cm_2_scaffold_267_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6548..7432
DNA (885bp) protein (295aa)
Cell division protein FtsX n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJL6_9BACT
cell division protein FtsX; K09811 cell division transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Cell division protein FtsX
13_1_20cm_2_scaffold_267_8
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

7429..8625
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJL7_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
hypothetical protein
13_1_20cm_2_scaffold_267_9
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

8639..9895
DNA (1257bp) protein (419aa)
ctpA; Carboxy-terminal-processing protease (C-terminal-processing protease) (EC:3.4.21.102) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
ctpA; Carboxy-terminal-processing protease (C-terminal-processing protease) (EC:3.4.21.102)
Carboxy-terminal-processing protease (C-terminal-processing protease) n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJL8_9BACT rbh
13_1_20cm_2_scaffold_267_10
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists


9917..10921
DNA (1005bp) protein (335aa)
O-sialoglycoprotein endopeptidase; K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=TSAD_SYMTH
O-sialoglycoprotein endopeptidase
13_1_20cm_2_scaffold_267_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

10918..11994
DNA (1077bp) protein (359aa)
signal transduction histidine kinase, nitrogen specific, NtrB (EC:2.7.13.3); K07708 two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] Tax=RIFCSPLOWO2_12
signal transduction histidine kinase, nitrogen specific, NtrB (EC:2.7.13.3)
Signal transduction histidine kinase, nitrogen specific, NtrB n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M6L7_GEODF
13_1_20cm_2_scaffold_267_12
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

11994..13427
DNA (1434bp) protein (478aa)
Nitrogen fixation master sigma-54-dependent transcriptional response regulator n=2 Tax=Geobacter sulfurreducens RepID=D7AHE1_GEOSK
ntrC; nitrogen regulation protein NR(I); K07712 two-component system, NtrC family, nitrogen regulation response regulator GlnG Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
gnfM; nitrogen fixation master sigma-54-dependent transcriptional response regulator
13_1_20cm_2_scaffold_267_13
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13499..14668
DNA (1170bp) protein (390aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00037EBB12 rbh
Uncharacterized protein {ECO:0000313|EMBL:ACS20263.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Var
hypothetical protein
13_1_20cm_2_scaffold_267_14
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

14665..16245
DNA (1581bp) protein (527aa)
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TQH0_9PROT
family 5 extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=GWC2_Rokubacteria_70_16_curated
extracellular solute-binding protein, family 5 middle family protein 6
13_1_20cm_2_scaffold_267_15
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

16242..17180
DNA (939bp) protein (313aa)
N-carbamyl-D-amino acid amidohydrolase n=1 Tax=Thauera sp. 28 RepID=N6YKU2_9RHOO rbh
N-carbamyl-D-amino acid amidohydrolase Tax=GWA2_Rokubacteria_70_23_curated
N-carbamoyl-D-amino acid hydrolase
13_1_20cm_2_scaffold_267_16
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

17438..17815
DNA (378bp) protein (126aa)
Fis family transcriptional regulator n=1 Tax=Desulfovibrio longus RepID=UPI0003B5499F
two component transcriptional regulator Tax=GWA2_Rokubacteria_73_35_curated
PAS/PAC sensor hybrid histidine kinase
13_1_20cm_2_scaffold_267_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(17831..19504)
DNA (1674bp) protein (558aa)
Phosphomethylpyrimidine synthase n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NWK9_9BACT
thiamine biosynthesis protein ThiC; K03147 thiamine biosynthesis protein ThiC Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
thiamine biosynthesis protein ThiC
13_1_20cm_2_scaffold_267_18
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(19700..21601)
DNA (1902bp) protein (634aa)
Asparagine synthetase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DE87_SINAD
asparagine synthase, glutamine-hydrolyzing Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
asparagine synthase
13_1_20cm_2_scaffold_267_19
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(21765..22514)
DNA (750bp) protein (250aa)
Glycosyl transferase family 2 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XIQ5_9BACT
family 2 glycosyl transferase Tax=GWA2_Rokubacteria_73_35_curated
family 2 glycosyl transferase
13_1_20cm_2_scaffold_267_20
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(22559..24232)
DNA (1674bp) protein (558aa)
Uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q2L4_9BACT
Polymyxin resistance protein ArnT, undecaprenyl phosphate-alpha-L-Ara4N transferase Melittin resistance protein PqaB Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
glycosyl transferase family protein
13_1_20cm_2_scaffold_267_21
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

24831..25142
DNA (312bp) protein (104aa)
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
13_1_20cm_2_scaffold_267_22
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

25158..25628
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XPM0_SORCE
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
13_1_20cm_2_scaffold_267_23
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(25530..33980)
DNA (8451bp) protein (2817aa)
glycosyltransferase; K13688 cyclic beta-1,2-glucan synthetase [EC:2.4.1.-] Tax=CSP1_6_Rokubacteria
Cellobiose phosphorylase n=1 Tax=Burkholderia sp. Ch1-1 RepID=I2ITB3_9BURK rbh
putative cyclic beta 1-2 glucan synthetase
13_1_20cm_2_scaffold_267_24
unknown

Not on your lists

comp(34191..34421)
DNA (231bp) protein (77aa)

This feature has no annotations

13_1_20cm_2_scaffold_267_25
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(34479..34733)
DNA (255bp) protein (85aa)
Tax=CSP1_6_Rokubacteria
13_1_20cm_2_scaffold_267_26
unknown

Not on your lists

34804..35064
DNA (261bp) protein (87aa)

This feature has no annotations

13_1_20cm_2_scaffold_267_27
unknown

Not on your lists

35255..35500
DNA (246bp) protein (82aa)

This feature has no annotations

13_1_20cm_2_scaffold_267_28
unknown

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35497..35751
DNA (255bp) protein (85aa)

This feature has no annotations

13_1_20cm_2_scaffold_267_29
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(35824..36234)
DNA (411bp) protein (137aa)
Putative Fimbrial protein pilin n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MMF8_9BACT
Fimbrial protein pilin Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Fimbrial protein pilin
13_1_20cm_2_scaffold_267_30
unknown

Not on your lists

comp(36305..36595)
DNA (291bp) protein (97aa)

This feature has no annotations

Displaying 30 items

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