ggKbase home page

13_1_20cm_2_scaffold_493

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_493_1
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(3..698)
DNA (696bp) protein (232aa)
succinate-semialdehyde dehydrogenase; K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16] Tax=CSP1_5_NC10
gabD2; succinate semialdehyde dehydrogenase (EC:1.2.1.16)
hypothetical protein n=1 Tax=Synechococcus sp. PCC 7336 RepID=UPI0003457519
13_1_20cm_2_scaffold_493_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(909..2195)
DNA (1287bp) protein (429aa)
hypothetical protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI00036E98DC
amidase Tax=GWA2_Rokubacteria_73_35_curated
amidase
13_1_20cm_2_scaffold_493_3
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2481..4475)
DNA (1995bp) protein (665aa)
TRAP C4-dicarboxylate transport system permease DctM subunit n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KNV5_9BURK rbh
TRAP C4-dicarboxylate transport system permease DctM Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
TRAP dicarboxylate transporter subunit DctM
13_1_20cm_2_scaffold_493_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(4472..5140)
DNA (669bp) protein (223aa)
Putative transporter dctQ related transmembrane protein n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3ME37_RHISN
putative transporter dctQ related transmembrane protein Tax=GWA2_Rokubacteria_73_35_curated
transporter dctQ related transmembrane protein
13_1_20cm_2_scaffold_493_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(5212..6396)
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D1Q7_BRAJP
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
C4-dicarboxylate ABC transporter
13_1_20cm_2_scaffold_493_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(6523..7200)
DNA (678bp) protein (226aa)
Protease Do n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LJT6_SYNFM
htrA; periplasmic serine protease Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
protease Do
13_1_20cm_2_scaffold_493_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(7200..7838)
DNA (639bp) protein (213aa)
ATP-dependent protease La n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MMP7_CORCM
lon3; ATP-dependent protease La; K07157 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
lon3; ATP-dependent protease La
13_1_20cm_2_scaffold_493_8
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(7847..9121)
DNA (1275bp) protein (425aa)
Mrp n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KYI0_THERP
hypothetical protein; K03593 ATP-binding protein involved in chromosome partitioning Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
hypothetical protein
13_1_20cm_2_scaffold_493_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

9221..9703
DNA (483bp) protein (161aa)
Putative oxidoreductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA32_GEMAT
putative oxidoreductase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
flavin reductase domain protein FMN-binding protein
13_1_20cm_2_scaffold_493_10
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

9700..10779
DNA (1080bp) protein (360aa)
glutamine--scyllo-inositol transaminase (EC:2.6.1.50)
DegT/DnrJ/EryC1/StrS aminotransferase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XIQ6_9BACT
lpsC; perosamine synthetase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
13_1_20cm_2_scaffold_493_11
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

10799..11899
DNA (1101bp) protein (367aa)
Glycosyl transferase, group 1 n=1 Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1ASN1_PELPD
group 1 glycosyl transferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
group 1 glycosyl transferase
13_1_20cm_2_scaffold_493_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

11896..13644
DNA (1749bp) protein (583aa)
phospholipid-lipopolysaccharide ABC transporter; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Lipid A export ATP-binding/permease protein MsbA n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=MSBA_SYNAS
phospholipid-lipopolysaccharide ABC transporter
13_1_20cm_2_scaffold_493_13
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13694..14254)
DNA (561bp) protein (187aa)
NADPH-dependent FMN reductase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9NZJ1_9DELT
NADPH-dependent FMN reductase {ECO:0000313|EMBL:EPX55447.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" sour
NADPH-dependent fmn reductase
13_1_20cm_2_scaffold_493_14
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14712..16472)
DNA (1761bp) protein (587aa)
aldehyde dehydrogenase n=1 Tax=Bradyrhizobium elkanii RepID=UPI00036CAC3D
Tat (Twin-arginine translocation) pathway signal sequence {ECO:0000313|EMBL:ERF85174.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhiz
aerobic-type carbon monoxide dehydrogenase
13_1_20cm_2_scaffold_493_15
Burkholderia sp. MSh2, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16469..16948)
DNA (480bp) protein (160aa)
(2Fe-2S)-binding domain protein n=6 Tax=Burkholderia multivorans RepID=A9AKC6_BURM1
(2Fe-2S)-binding protein {ECO:0000313|EMBL:KEZ03015.1}; TaxID=1506588 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp.
[2Fe-2S] binding domain protein
13_1_20cm_2_scaffold_493_16
unknown

Not on your lists

comp(17209..17517)
DNA (309bp) protein (103aa)

This feature has no annotations

13_1_20cm_2_scaffold_493_17
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18250..19323)
DNA (1074bp) protein (358aa)
Oxidoreductase n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0K4N0_SACES
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
Oxidoreductase
13_1_20cm_2_scaffold_493_18
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

19439..20476
DNA (1038bp) protein (346aa)
ABC transporter substrate-binding protein n=1 Tax=Nocardia sp. BMG111209 RepID=UPI000372842B
extracellular ligand-binding receptor Tax=CSP1_6_Rokubacteria
extracellular ligand-binding receptor
13_1_20cm_2_scaffold_493_19
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

20638..21486
DNA (849bp) protein (283aa)
hypothetical protein n=1 Tax=Bacillus sp. ZYK RepID=UPI0002F68D16 rbh
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein Tax=CSP1_6_Rokubacteria
inner-membrane translocator
13_1_20cm_2_scaffold_493_20
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22368..23030
DNA (663bp) protein (221aa)
ABC transporter related protein n=1 Tax=Desulfovibrio sp. X2 RepID=S7VCT3_9DELT
ABC-type branched-chain amino acid transport systems, ATPase component; K01995 branched-chain amino acid transport system ATP-binding protein Tax=RBG_13_Deltaproteobacteria_43_22_curated
braF; High-affinity branched-chain amino acid transport ATP-binding protein BraF
13_1_20cm_2_scaffold_493_21
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

23027..23737
DNA (711bp) protein (237aa)
amino acid ABC transporter ATPase n=1 Tax=Streptomyces sp. CNS615 RepID=UPI00037A1A56
ABC transporter-like protein; K01996 branched-chain amino acid transport system ATP-binding protein Tax=CSP1_6_Rokubacteria
amino acid ABC transporter ATP-binding protein
Displaying 21 items

View Taxonomy