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13_1_20cm_2_scaffold_5563

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_5563_1
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..295
DNA (294bp) protein (98aa)
Plasma membrane H+-transporting two-sector ATPase n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P6U4_AZOS1
peptidoglycan binding domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
plasma membrane H+-transporting two-sector ATPase
13_1_20cm_2_scaffold_5563_2
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(352..1395)
DNA (1044bp) protein (348aa)
Putative glycosyltransferase n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L1Z3_THERP
group 1 glycosyl transferase Tax=CSP1_5_NC10
putative glycosyltransferase
13_1_20cm_2_scaffold_5563_3
Candidatus Jettenia caeni, Candidatus Jettenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

1434..3542
DNA (2109bp) protein (703aa)
Putative amylo-alpha-1,6-glucosidase n=1 Tax=planctomycete KSU-1 RepID=I3IPX7_9PLAN
Putative amylo-alpha-1,6-glucosidase {ECO:0000313|EMBL:GAB63772.1}; TaxID=247490 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae.;" source="planctomycete KSU-1.;
amylo-alpha-16-glucosidase
13_1_20cm_2_scaffold_5563_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3700..4455)
DNA (756bp) protein (252aa)
peptidase, M50 family protein (EC:3.4.24.-) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
putative membrane-associated zinc metallopeptidase (EC:3.4.24.-)
Putative Membrane-associated zinc metallopeptidase containing CBS domain pair n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAW4_9BACT
13_1_20cm_2_scaffold_5563_5
Polaromonas sp. CG9_12, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4536..5777
DNA (1242bp) protein (414aa)
Cardiolipin synthetase {ECO:0000313|EMBL:CDS54800.1}; EC=2.7.8.- {ECO:0000313|EMBL:CDS54800.1};; TaxID=1504672 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; P
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase n=1 Tax=Xanthomonas perforans 91-118 RepID=F0BX23_9XANT
cls; cardiolipin synthetase
13_1_20cm_2_scaffold_5563_6
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(5811..6065)
DNA (255bp) protein (85aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI0002E23292
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
hypothetical protein
13_1_20cm_2_scaffold_5563_7
unknown

Not on your lists

comp(6149..6340)
DNA (192bp) protein (64aa)

This feature has no annotations

13_1_20cm_2_scaffold_5563_8
unknown

Not on your lists

6472..6672
DNA (201bp) protein (67aa)

This feature has no annotations

13_1_20cm_2_scaffold_5563_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6676..7422)
DNA (747bp) protein (249aa)
Radical SAM domain protein n=1 Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) RepID=B8HSF7_CYAP4
radical SAM domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
radical SAM protein
13_1_20cm_2_scaffold_5563_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

8263..9030
DNA (768bp) protein (256aa)
3-hydroxyacyl-CoA dehydrogenase type II (EC:1.1.1.35)
3-hydroxyacyl-CoA dehydrogenase type II n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08PN9_STIAD
hsd17b10, abad, camr, erab, hadh2, hcd2, hsd10, mhbd, mrpp2, mrx17, mrx31, mrxs10, schad, sdr5c1; hydroxysteroid (17-beta) dehydrogenase 10; K08683 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxy-2-methyl
13_1_20cm_2_scaffold_5563_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

9237..9890
DNA (654bp) protein (218aa)
Spermidine synthase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
13_1_20cm_2_scaffold_5563_12
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(9868..11547)
DNA (1680bp) protein (560aa)
ABC transporter related protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LXN9_HALO1 alias=16ft_combo_ws3_scaffold_10754_31 id=5223300 tax=16ft_combo_ws3 species=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria
ABC transporter Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
ABC transporter
13_1_20cm_2_scaffold_5563_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(11548..11994)
DNA (447bp) protein (149aa)
CoA-binding domain protein n=1 Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NND1_MARHT
CoA-binding domain-containing protein; K06929 Tax=GWA2_Rokubacteria_73_35_curated
CoA-binding domain-containing protein
13_1_20cm_2_scaffold_5563_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(12008..12784)
DNA (777bp) protein (259aa)
3'-5' exonuclease; K03684 ribonuclease D [EC:3.1.13.5] Tax=GWA2_Rokubacteria_73_35_curated
3'-5' exonuclease n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E3R4_GEOLS
3'-5' exonuclease
13_1_20cm_2_scaffold_5563_15
unknown

Not on your lists

12816..13085
DNA (270bp) protein (90aa)

This feature has no annotations

13_1_20cm_2_scaffold_5563_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(13082..13864)
DNA (783bp) protein (261aa)
Short chain dehydrogenase n=1 Tax=Mycobacterium xenopi RIVM700367 RepID=I0RFM0_MYCXE
short-chain dehydrogenase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
short-chain type dehydrogenase/reductase
13_1_20cm_2_scaffold_5563_17
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13910..14293)
DNA (384bp) protein (128aa)
Sensory box histidine kinase/response regulator n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CPS3_MYXFH
Sensory box histidine kinase/response regulator {ECO:0000313|EMBL:AEI62946.1}; TaxID=483219 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxoc
sensory box histidine kinase/response regulator
13_1_20cm_2_scaffold_5563_18
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(14335..15144)
DNA (810bp) protein (270aa)
Putative Nucleotidyl transferase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MEJ9_9BACT
Nucleotidyl transferase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Nucleotidyl transferase
13_1_20cm_2_scaffold_5563_19
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

15453..15947
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00036E3755
endoribonuclease L-PSP Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
translation initiation inhibitor
13_1_20cm_2_scaffold_5563_20
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

15947..16855
DNA (909bp) protein (303aa)
3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31); K00020 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31)
UniRef90_D6TBL0 2-hydroxy-3-oxopropionate reductase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TBL0_9CHLR alias=RBG9_39_40,RBG9_C00039G00040 id=1245701 tax=RBG9 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi
13_1_20cm_2_scaffold_5563_21
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

16852..17346
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AMD8_AZOBR
conserved protein of unknown function; putative thioesterase domain Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
conserved protein of unknown function; putative thioesterase domain
13_1_20cm_2_scaffold_5563_22
CSP1_5_NC10, NC10, Bacteria

Not on your lists

17385..17957
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI00034A0074
ribosomal protein L11 methylase Tax=CSP1_5_NC10
hypothetical protein
13_1_20cm_2_scaffold_5563_23
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17939..19417)
DNA (1479bp) protein (493aa)
amidohydrolase; K12960 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28] Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003796F91
amidohydrolase
13_1_20cm_2_scaffold_5563_24
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19414..20934)
DNA (1521bp) protein (507aa)
Putative ABC transporter n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4Z864_9BRAD
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KJB93926.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Ske
putative ABC transporter
13_1_20cm_2_scaffold_5563_25
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20931..21824)
DNA (894bp) protein (298aa)
ABC transporter permease protein n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TJU4_TISMK
ABC transporter permease {ECO:0000313|EMBL:KJB93928.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella ae
Putative ABC transporter (permease protein)
13_1_20cm_2_scaffold_5563_26
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21923..22960)
DNA (1038bp) protein (346aa)
Simple sugar transport system permease protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P1B4_AZOS1
ABC transporter permease {ECO:0000313|EMBL:EWY37379.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella st
simple sugar transport system permease protein
13_1_20cm_2_scaffold_5563_27
Burkholderia gladioli, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22965..24011)
DNA (1047bp) protein (349aa)
Basic membrane lipoprotein n=1 Tax=Burkholderia gladioli (strain BSR3) RepID=F2L8Q3_BURGS
Basic membrane lipoprotein {ECO:0000313|EMBL:AEA61279.1}; TaxID=999541 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia gl
basic membrane lipoprotein
13_1_20cm_2_scaffold_5563_28
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(24048..24410)
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI00026272A1
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein
Displaying 28 items

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