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13_1_20cm_full_scaffold_133

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_133_1
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(1..543)
DNA (543bp) protein (181aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoni
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D419_9BACT
hypothetical protein
13_1_20cm_full_scaffold_133_2
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(699..1565)
DNA (867bp) protein (289aa)
Hydroxymethylglutaryl-CoA lyase {ECO:0000313|EMBL:AEU38124.1}; EC=4.1.3.4 {ECO:0000313|EMBL:AEU38124.1};; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicel
Hydroxymethylglutaryl-CoA lyase n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8P1A6_GRAMM
Hydroxymethylglutaryl-CoA lyase
13_1_20cm_full_scaffold_133_3
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(1581..2717)
DNA (1137bp) protein (379aa)
Chaperone protein DnaJ n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D417_9BACT
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavu
chaperone protein DnaJ
13_1_20cm_full_scaffold_133_4
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(2778..3350)
DNA (573bp) protein (191aa)
Protein GrpE n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D416_9BACT
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chtho
GrpE protein HSP-70 cofactor
13_1_20cm_full_scaffold_133_5
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(3347..4786)
DNA (1440bp) protein (480aa)
Protein serine phosphatase with GAF(S) sensor(S) n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D415_9BACT rbh
Protein serine phosphatase with GAF(S) sensor(S) {ECO:0000313|EMBL:EDY18995.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthonioba
protein serine phosphatase with GAF(s) sensor(s)
13_1_20cm_full_scaffold_133_6
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(4799..5275)
DNA (477bp) protein (159aa)
Anti-sigma-factor antagonist n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D414_9BACT
Anti-sigma-factor antagonist {ECO:0000313|EMBL:EDY18994.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
rsbS; Anti-anti-sigma regulatory factor RsbS (antagonist of anti-sigma factor)
13_1_20cm_full_scaffold_133_7
unknown

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comp(5320..5454)
DNA (135bp) protein (45aa)

This feature has no annotations

13_1_20cm_full_scaffold_133_8
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(5460..6101)
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D413_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY18993.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
13_1_20cm_full_scaffold_133_9
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

6160..8901
DNA (2742bp) protein (914aa)
DNA ligase {ECO:0000256|RuleBase:RU000617}; EC=6.5.1.1 {ECO:0000256|RuleBase:RU000617};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavu
DNA ligase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D409_9BACT
DNA ligase I
13_1_20cm_full_scaffold_133_10
unknown

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comp(8925..9440)
DNA (516bp) protein (172aa)

This feature has no annotations

13_1_20cm_full_scaffold_133_11
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(9792..10406)
DNA (615bp) protein (205aa)
Phospholipid/glycerol acyltransferase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CW50_9BACT
Phospholipid/glycerol acyltransferase {ECO:0000313|EMBL:EDY21642.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
phospholipid/glycerol acyltransferase
13_1_20cm_full_scaffold_133_12
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(10414..11067)
DNA (654bp) protein (218aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:
cytidylate kinase (EC:2.7.4.14)
Cytidylate kinase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CW51_9BACT
13_1_20cm_full_scaffold_133_13
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(11145..12500)
DNA (1356bp) protein (452aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyru
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CW52_9BACT
aroA; 5-enolpyruvylshikimate-3-phosphate synthase and cytidylate kinase
13_1_20cm_full_scaffold_133_14
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

13162..14334
DNA (1173bp) protein (391aa)
Response regulator receiver modulated serine phosphatase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D1A0_9BACT
Response regulator receiver modulated serine phosphatase {ECO:0000313|EMBL:EDY19792.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus
response regulator receiver modulated serine phosphatase
13_1_20cm_full_scaffold_133_15
RLO_RIF03_38_15, RIF3, Bacteria

Not on your lists

14395..14676
DNA (282bp) protein (94aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001746B77
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF03_38_15_curated
hypothetical protein
13_1_20cm_full_scaffold_133_16
Methylacidiphilum fumariolicum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

Not on your lists

14806..15258
DNA (453bp) protein (151aa)
Thiol-disulfide isomerase or thioredoxin n=1 Tax=Methylacidiphilum fumariolicum SolV RepID=I0JXB5_9BACT
Thiol-disulfide isomerase or thioredoxin {ECO:0000313|EMBL:CCG91884.1}; TaxID=1156937 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methy
trxA; Thiol-disulfide isomerase or thioredoxin
13_1_20cm_full_scaffold_133_17
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

15389..16219
DNA (831bp) protein (277aa)
Polysaccharide deacetylase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZS3_9BACT
polysaccharide deacetylase Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
polysaccharide deacetylase
13_1_20cm_full_scaffold_133_18
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(16237..17070)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DAI5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY16503.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
13_1_20cm_full_scaffold_133_19
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(17219..18811)
DNA (1593bp) protein (531aa)
L-aspartate oxidase {ECO:0000256|RuleBase:RU362049}; EC=1.4.3.16 {ECO:0000256|RuleBase:RU362049};; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;"
L-aspartate oxidase (EC:1.4.3.16)
L-aspartate oxidase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DAI6_9BACT
13_1_20cm_full_scaffold_133_20
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(18892..19740)
DNA (849bp) protein (283aa)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-
Pantothenate synthetase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DAI7_9BACT
pantothenate synthetase
13_1_20cm_full_scaffold_133_21
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(19833..20528)
DNA (696bp) protein (232aa)
UbiE/COQ5 methyltransferase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DAK0_9BACT
UbiE/COQ5 methyltransferase {ECO:0000313|EMBL:EDY16518.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
type 11 methyltransferase
13_1_20cm_full_scaffold_133_22
Verrucomicrobium spinosum, Verrucomicrobium, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(20586..21332)
DNA (747bp) protein (249aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001746A85
13_1_20cm_full_scaffold_133_23

Not on your lists

comp(21351..23612)
DNA (2262bp) protein (754aa)
Glycosyl transferase family 2 n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RDR5_ARCPA
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48824.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
family 2 glycosyl transferase
13_1_20cm_full_scaffold_133_24
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

23674..25791
DNA (2118bp) protein (706aa)
Lipopolysaccharide heptosyltransferase II n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D3G7_9BACT
Lipopolysaccharide heptosyltransferase II {ECO:0000313|EMBL:EDY18797.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
lipid A biosynthesis acyltransferase
Displaying 24 items

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