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13_1_20cm_full_scaffold_26

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_26_1
Acidobacteriaceae bacterium KBS 83, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(240..659)
DNA (420bp) protein (140aa)
Immunoglobulin-like beta-sandwich Purple acid phosphatase, N-terminal domain
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003708F60
13_1_20cm_full_scaffold_26_2
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(743..2161)
DNA (1419bp) protein (473aa)
cytochrome c551 peroxidase (EC:1.11.1.5)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00036EF8B3
Uncharacterized protein {ECO:0000313|EMBL:KJC55703.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp
13_1_20cm_full_scaffold_26_3
Eggerthella sp. CAG:368, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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comp(2558..2953)
DNA (396bp) protein (132aa)
putative transcriptional regulator n=1 Tax=Bacillus sp. 10403023 RepID=UPI0002890E41
Transcriptional regulator AraC family {ECO:0000313|EMBL:CDD67022.1}; TaxID=1262877 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella; environmental sample
transcriptional regulator (fragment)
13_1_20cm_full_scaffold_26_4
Methylacidiphilum kamchatkense, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

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3342..5240
DNA (1899bp) protein (633aa)
ABC-type transport system involved in cytochrome c biogenesis, permease component n=1 Tax=Methylacidiphilum fumariolicum SolV RepID=I0K183_9BACT
ABC transporter permease {ECO:0000313|EMBL:KIE58520.1}; TaxID=1202785 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;"
cytochrome c assembly protein
13_1_20cm_full_scaffold_26_5
unknown

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5257..5493
DNA (237bp) protein (79aa)

This feature has no annotations

13_1_20cm_full_scaffold_26_6
unknown

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comp(5578..6078)
DNA (501bp) protein (167aa)

This feature has no annotations

13_1_20cm_full_scaffold_26_7
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

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comp(6202..6717)
DNA (516bp) protein (172aa)
Appr-1-p processing domain protein n=1 Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EGM7_AMICL
Appr-1-p processing protein
Appr-1-p processing domain protein {ECO:0000313|EMBL:ADE57709.1}; TaxID=572547 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminobacterium.;" source="Aminobacterium co
13_1_20cm_full_scaffold_26_8
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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comp(6856..7506)
DNA (651bp) protein (217aa)
pyridoxamine 5'-phosphate oxidase (EC:1.4.3.5)
Pyridoxal 5'-phosphate synthase {ECO:0000256|SAAS:SAAS00025317}; EC=1.4.3.5 {ECO:0000256|SAAS:SAAS00025317};; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae;
Pyridoxamine 5'-phosphate oxidase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UQF1_ROSS1
13_1_20cm_full_scaffold_26_9
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(7560..8741)
DNA (1182bp) protein (394aa)
Cysteine desulfurase NifS n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CTM6_9BACT
Cysteine desulfurase NifS {ECO:0000313|EMBL:EDY21880.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
cysteine desulfurase NifS
13_1_20cm_full_scaffold_26_10
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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8850..9947
DNA (1098bp) protein (366aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID
histidinol-phosphate aminotransferase n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001744961 rbh
histidinol-phosphate aminotransferase
13_1_20cm_full_scaffold_26_11
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

10124..11467
DNA (1344bp) protein (448aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" sourc
tRNA modification GTPase MnmE n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D719_9BACT rbh
tRNA modification GTPase TrmE
13_1_20cm_full_scaffold_26_12
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

11626..12636
DNA (1011bp) protein (337aa)
Dihydroorotate dehydrogenase (quinone) {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00054567}; EC=1.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00084821};; DHOdehase {ECO:00
dihydroorotate dehydrogenase (EC:1.3.3.1)
Dihydroorotate dehydrogenase (quinone) n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D718_9BACT
13_1_20cm_full_scaffold_26_13
Lawsonia intracellularis, Lawsonia, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12709..13407
DNA (699bp) protein (233aa)
Uncharacterized protein n=2 Tax=Lawsonia intracellularis RepID=M1GG23_LAWIN
hypothetical protein
NA {ECO:0000313|EMBL:CAJ54140.1}; TaxID=363253 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Lawsonia.;" source="Lawsonia intracellularis (strain PHE
13_1_20cm_full_scaffold_26_14
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

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comp(13530..13952)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6B219_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIQ01311.1}; Flags: Precursor;; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
13_1_20cm_full_scaffold_26_15

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comp(13949..14251)
DNA (303bp) protein (101aa)
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49423.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
13_1_20cm_full_scaffold_26_16

Not on your lists

comp(14248..14829)
DNA (582bp) protein (194aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XJL6_9BACT
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49422.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ECF subfamily RNA polymerase sigma-24 factor
13_1_20cm_full_scaffold_26_17

Not on your lists

15043..15423
DNA (381bp) protein (127aa)
Putative uncharacterized protein n=1 Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QLH7_DESB2
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49421.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
13_1_20cm_full_scaffold_26_18

Not on your lists

comp(15513..15722)
DNA (210bp) protein (70aa)
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49420.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
13_1_20cm_full_scaffold_26_19

Not on your lists

15792..17537
DNA (1746bp) protein (582aa)
gamma-glutamyltransferase n=1 Tax=Kangiella aquimarina RepID=UPI000365CCF5 rbh
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49419.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
gamma-glutamyltransferase
13_1_20cm_full_scaffold_26_20

Not on your lists

comp(17626..18213)
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CV42_9BACT
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49418.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
13_1_20cm_full_scaffold_26_21
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18282..21914)
DNA (3633bp) protein (1211aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037C63CB
Patatin-like phospholipase {ECO:0000313|EMBL:GAM10153.1}; Flags: Precursor;; TaxID=1266765 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" sour
hypothetical protein
13_1_20cm_full_scaffold_26_22
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

22198..23568
DNA (1371bp) protein (457aa)
Putative Dehyrogenase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9EXP8_SORC5
tryptophan halogenase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
dehydrogenase
13_1_20cm_full_scaffold_26_23
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23655..24962)
DNA (1308bp) protein (436aa)
Sodium/hydrogen exchanger n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21ZG4_RHOFD
sodium/hydrogen exchanger
Sodium/hydrogen exchanger {ECO:0000313|EMBL:ABD68839.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferriredu
13_1_20cm_full_scaffold_26_24
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

25099..26466
DNA (1368bp) protein (456aa)
electron transfer flavoprotein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001744DE5 rbh
FAD dependent oxidoreductase {ECO:0000313|EMBL:EDY21682.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
putative oxidoreductase
Displaying 24 items

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