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13_1_20cm_full_scaffold_387

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_387_1
Tetrahymena thermophila, Tetrahymena, Hymenostomatida, Oligohymenophorea, Eukaryota

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comp(2..535)
DNA (534bp) protein (178aa)
TPR repeat:Sel1-like repeat:Sel1-like repeat n=1 Tax=Crocosphaera watsonii WH 8501 RepID=Q4CAF1_CROWT
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EWS73459.1}; TaxID=312017 species="Eukaryota; Alveolata; Ciliophora; Intramacronucleata; Oligohymenophorea; Hymenostomatida; Tetrahymenina; Tetrahyme
sulfotransferase
13_1_20cm_full_scaffold_387_2
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(540..1004)
DNA (465bp) protein (155aa)
molybdenum cofactor biosynthesis protein MoaC n=1 Tax=Verrucomicrobium spinosum RepID=UPI00017468B0
Molybdenum cofactor biosynthesis protein C {ECO:0000313|EMBL:EEF61050.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedospha
molybdenum cofactor biosynthesis protein c
13_1_20cm_full_scaffold_387_3
Verrucomicrobia bacterium IMCC26134, Verrucomicrobia, Bacteria

Not on your lists

comp(1126..2046)
DNA (921bp) protein (307aa)
Cyclic pyranopterin phosphate synthase {ECO:0000256|SAAS:SAAS00064088}; EC=4.1.99.18 {ECO:0000256|SAAS:SAAS00064088};; TaxID=1637999 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia.;"
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001744BA9
hypothetical protein
13_1_20cm_full_scaffold_387_4

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2215..2646
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001744BA8
Marine sediment metagenome DNA, contig: S01H1_S31404 {ECO:0000313|EMBL:GAG40446.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
hypothetical protein
13_1_20cm_full_scaffold_387_5
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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2703..4169
DNA (1467bp) protein (489aa)
UbiD family decarboxylase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D171_9BACT rbh
UbiD family decarboxylase {ECO:0000313|EMBL:EDY20083.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
ubiD; 3-polyprenyl-4-hydroxybenzoate decarboxylase
13_1_20cm_full_scaffold_387_6
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(4189..4578)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D170_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY20082.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
13_1_20cm_full_scaffold_387_7
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(5027..5875)
DNA (849bp) protein (283aa)
Squalene/phytoene synthase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D169_9BACT
Squalene/phytoene synthase {ECO:0000313|EMBL:EDY20081.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
erg9; Phytoene/squalene synthetase fused to flavin containing amine oxidoreductase
13_1_20cm_full_scaffold_387_8
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(5901..7079)
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D167_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY20079.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
13_1_20cm_full_scaffold_387_9
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(7180..8271)
DNA (1092bp) protein (364aa)
lepB; Signal peptidase I; K03100 signal peptidase I [EC:3.4.21.89] Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
Signal peptidase I n=1 Tax=Methylacidiphilum fumariolicum SolV RepID=I0JXV1_9BACT
lepB; Signal peptidase I
13_1_20cm_full_scaffold_387_10
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(8388..10184)
DNA (1797bp) protein (599aa)
Elongation factor 4 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZN7_9BACT
GTP-binding protein LepA; K03596 GTP-binding protein LepA Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
GTP-binding protein LepA
13_1_20cm_full_scaffold_387_11
unknown

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10645..10857
DNA (213bp) protein (71aa)

This feature has no annotations

13_1_20cm_full_scaffold_387_12

Not on your lists

comp(11090..11383)
DNA (294bp) protein (98aa)
Uncharacterized protein n=2 Tax=Ralstonia solanacearum RepID=Q8Y348_RALSO
Marine sediment metagenome DNA, contig: S12H4_L01038 {ECO:0000313|EMBL:GAI83737.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
13_1_20cm_full_scaffold_387_13
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

11558..12049
DNA (492bp) protein (164aa)
FHA domain containing protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CVG0_9BACT
FHA domain containing protein {ECO:0000313|EMBL:EDY21402.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
FHA domain-containing protein
13_1_20cm_full_scaffold_387_14
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

12082..12804
DNA (723bp) protein (241aa)
Haloacid dehalogenase domain protein hydrolase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D0I4_9BACT
Haloacid dehalogenase domain protein hydrolase {ECO:0000313|EMBL:EDY19846.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.
hydrolase
13_1_20cm_full_scaffold_387_15
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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12827..13180
DNA (354bp) protein (118aa)
Anti-sigma factor antagonist n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D8T7_9BACT
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
anti-sigma-factor antagonist
13_1_20cm_full_scaffold_387_16
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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13238..13822
DNA (585bp) protein (195aa)
Isoprenylcysteine carboxyl methyltransferase family protein n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F1S5_ACIC5
isoprenylcysteine carboxyl methyltransferase family protein
Isoprenylcysteine carboxyl methyltransferase family protein {ECO:0000313|EMBL:ACO33473.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source=
13_1_20cm_full_scaffold_387_17
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(13803..14936)
DNA (1134bp) protein (378aa)
Glycosyl transferase group 1 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D8R4_9BACT rbh
Glycosyl transferase group 1 {ECO:0000313|EMBL:EDY17122.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
glucuronic acid transferase WabG
13_1_20cm_full_scaffold_387_18
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

15128..16351
DNA (1224bp) protein (408aa)
Glycosyl transferase group 1 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CWW8_9BACT rbh
Glycosyl transferase group 1 {ECO:0000313|EMBL:EDY21288.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
glycosyltransferase
13_1_20cm_full_scaffold_387_19
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

16403..17419
DNA (1017bp) protein (339aa)
lipopolysaccharide heptosyltransferase III, putative n=1 Tax=Verrucomicrobium spinosum RepID=UPI00017458EE
Glycosyl transferase family 9 {ECO:0000313|EMBL:EDY17123.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
lipopolysaccharide glucosyltransferase
13_1_20cm_full_scaffold_387_20
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

17416..19293
DNA (1878bp) protein (626aa)
ABC transporter-related protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D8R6_9BACT rbh
ABC transporter-related protein {ECO:0000313|EMBL:EDY17124.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin
msbA; putative lipid A export ATP-binding/permease protein MsbA
13_1_20cm_full_scaffold_387_21
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

19414..20058
DNA (645bp) protein (215aa)
PHP domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D0I8_9BACT
PHP domain protein {ECO:0000313|EMBL:EDY19850.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Metal-dependent phosphoesterase (PHP family)
13_1_20cm_full_scaffold_387_22
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

Not on your lists

20169..20465
DNA (297bp) protein (99aa)
hypothetical protein n=1 Tax=SAR324 cluster bacterium SCGC AAA240-J09 RepID=UPI000305BF67
hypothetical protein Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
hypothetical protein
13_1_20cm_full_scaffold_387_23
unknown

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21065..21232
DNA (168bp) protein (56aa)

This feature has no annotations

13_1_20cm_full_scaffold_387_24
unknown

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22012..22446
DNA (435bp) protein (145aa)

This feature has no annotations

13_1_20cm_full_scaffold_387_25
unknown

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22556..22666
DNA (111bp) protein (37aa)

This feature has no annotations

Displaying 25 items

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