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13_1_20cm_full_scaffold_491

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_491_1
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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70..399
DNA (330bp) protein (110aa)
30S ribosomal protein S6 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CYA1_9BACT
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
rpsF; 30S ribosomal protein S6
13_1_20cm_full_scaffold_491_2
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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418..867
DNA (450bp) protein (150aa)
single-stranded DNA-binding protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745814
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spa
single-strand binding protein
13_1_20cm_full_scaffold_491_3
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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901..2001
DNA (1101bp) protein (367aa)
DNA protecting protein DprA n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D957_9BACT
DNA protecting protein DprA {ECO:0000313|EMBL:EDY17102.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
DNA protecting protein DprA
13_1_20cm_full_scaffold_491_4
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

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2095..5007
DNA (2913bp) protein (971aa)
DNA topoisomerase III; K03169 DNA topoisomerase III [EC:5.99.1.2] Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
DNA topoisomerase III (EC:5.99.1.2)
DNA topoisomerase n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K1K8_AZOSB
13_1_20cm_full_scaffold_491_5
R_SM2F11_45_18, SM2F11, Bacteria

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comp(5031..6056)
DNA (1026bp) protein (342aa)
Putative permease, DMT superfamily n=1 Tax=Desulfitobacterium dehalogenans (strain ATCC 51507 / DSM 9161 / JW/IU-DC1) RepID=I4A7I6_DESDJ
DMT(drug/metabolite transporter) superfamily permease Tax=RIFCSPHIGHO2_01_FULL_SM2F11_45_18_curated
permease, DMT superfamily
13_1_20cm_full_scaffold_491_6
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

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6282..6836
DNA (555bp) protein (185aa)
NrdR family transcriptional regulator n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745E16
nrdR; transcriptional regulator NrdR; K07738 transcriptional repressor NrdR Tax=GWF2_Lentisphaerae_57_35_curated
ATP-cone domain-containing protein
13_1_20cm_full_scaffold_491_7
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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6823..7389
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D973_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY16976.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
13_1_20cm_full_scaffold_491_8
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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7505..7840
DNA (336bp) protein (112aa)
zinc-binding protein n=1 Tax=Schlesneria paludicola RepID=UPI00029A9E9B
Histidine triad (HIT) protein {ECO:0000313|EMBL:EDY16977.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
histidine triad (HIT) protein
13_1_20cm_full_scaffold_491_9
unknown

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comp(7906..8193)
DNA (288bp) protein (96aa)

This feature has no annotations

13_1_20cm_full_scaffold_491_10
unknown

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8715..8921
DNA (207bp) protein (69aa)

This feature has no annotations

13_1_20cm_full_scaffold_491_11
Bdellovibrio exovorus, Bdellovibrio, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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9024..10322
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=Bdellovibrio exovorus JSS RepID=M4V9D8_9DELT rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH95992.1}; TaxID=1184267 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bdellovibrionaceae; Bdellovibrio.;" source="Bdellovibrio
13_1_20cm_full_scaffold_491_12
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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10413..10853
DNA (441bp) protein (147aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=497964 species="Bacteria; Ve
Endoribonuclease YbeY n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DBP4_9BACT
hypothetical protein
13_1_20cm_full_scaffold_491_13
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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10979..11350
DNA (372bp) protein (124aa)
ATP-dependent Clp protease adapter protein ClpS n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DBP2_9BACT
ATP-dependent Clp protease adapter protein ClpS {ECO:0000256|HAMAP-Rule:MF_00302}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Elli
clpS; ATP-dependent Clp protease adapter protein ClpS
13_1_20cm_full_scaffold_491_14
unknown

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11352..11843
DNA (492bp) protein (164aa)

This feature has no annotations

13_1_20cm_full_scaffold_491_15
unknown

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comp(11861..12097)
DNA (237bp) protein (79aa)

This feature has no annotations

13_1_20cm_full_scaffold_491_16
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(12087..12713)
DNA (627bp) protein (209aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D199_9BACT
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EDY19791.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428
ECF subfamily RNA polymerase sigma-24 factor
13_1_20cm_full_scaffold_491_17
Candidatus Brocadia sinica, Candidatus Brocadia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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13019..16330
DNA (3312bp) protein (1104aa)
Trehalose synthase n=1 Tax=planctomycete KSU-1 RepID=I3IMF5_9PLAN rbh
Maltose alpha-D-glucosyltransferase {ECO:0000313|EMBL:GAN31608.1}; TaxID=1197129 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Brocadia
alpha-amylase
13_1_20cm_full_scaffold_491_18
Neochlamydia sp. EPS4, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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16476..17009
DNA (534bp) protein (178aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036BC832
PqqC-like protein {ECO:0000313|EMBL:KIC75250.1}; TaxID=1478175 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. EPS4.;"
coenzyme PQQ synthesis protein C family protein
Displaying 18 items

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