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13_1_20cm_full_scaffold_97

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_97_1
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..444
DNA (444bp) protein (148aa)
Beta-lactamase domain protein n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JTH9_HYPDA
beta-lactamase
Beta-lactamase domain protein {ECO:0000313|EMBL:ADJ22541.1}; Flags: Precursor;; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" s
13_1_20cm_full_scaffold_97_2
unknown

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623..1120
DNA (498bp) protein (166aa)

This feature has no annotations

13_1_20cm_full_scaffold_97_3
unknown

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comp(1303..1515)
DNA (213bp) protein (71aa)

This feature has no annotations

13_1_20cm_full_scaffold_97_trna_4
unknown

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comp(1670..1741)
DNA (72bp)
transferRNA
13_1_20cm_full_scaffold_97_4

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comp(1798..2373)
DNA (576bp) protein (192aa)
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48586.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
13_1_20cm_full_scaffold_97_trna_1
unknown

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2452..2525
DNA (74bp)
transferRNA
13_1_20cm_full_scaffold_97_5
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2538..5318)
DNA (2781bp) protein (927aa)
Methionine synthase n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GLZ0_THISH
Methionine synthase {ECO:0000313|EMBL:ACL71743.1}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibr
metH; B12-dependent methionine synthase
13_1_20cm_full_scaffold_97_6

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comp(5315..6415)
DNA (1101bp) protein (367aa)
Methionine synthase n=1 Tax=Akkermansia muciniphila (strain ATCC BAA-835) RepID=B2UNQ8_AKKM8
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48588.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
methionine synthase
13_1_20cm_full_scaffold_97_7

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6712..7896
DNA (1185bp) protein (395aa)
Putative metabolite transport protein YjhB n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3XE32_RHIFR
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48590.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
yjhB; metabolite transport protein YjhB
13_1_20cm_full_scaffold_97_8

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comp(7893..8627)
DNA (735bp) protein (245aa)
Cell wall hydrolase/autolysin n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6I8_9BACT
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48591.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
lytC; N-acetylmuramoyl-L-alanine amidase
13_1_20cm_full_scaffold_97_9

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8782..10056
DNA (1275bp) protein (425aa)
Polysaccharide deacetylase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D1X8_9BACT rbh
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48592.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
polysaccharide deacetylase
13_1_20cm_full_scaffold_97_10

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10079..11572
DNA (1494bp) protein (498aa)
Signal recognition particle protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D1X7_9BACT
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured
signal recognition particle protein
13_1_20cm_full_scaffold_97_11

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11574..11906
DNA (333bp) protein (111aa)
30S ribosomal protein S16 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D1X6_9BACT
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
30S ribosomal protein S16
13_1_20cm_full_scaffold_97_12

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12089..12319
DNA (231bp) protein (77aa)
UPF0109 protein CfE428DRAFT_2913 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D1X5_9BACT
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48595.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
13_1_20cm_full_scaffold_97_13

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12444..13052
DNA (609bp) protein (203aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltrans
tRNA (guanine-N1)-methyltransferase (EC:2.1.1.31)
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XSG7_9BACT
13_1_20cm_full_scaffold_97_14

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comp(13197..14444)
DNA (1248bp) protein (416aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured b
fabF; 3-oxoacyl-ACP synthase II (EC:2.3.1.179)
Beta-ketoacyl synthase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CYC3_9BACT
13_1_20cm_full_scaffold_97_15

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comp(14441..14896)
DNA (456bp) protein (152aa)
Cyclase/dehydrase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CYC4_9BACT
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48598.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
cyclase/dehydrase
13_1_20cm_full_scaffold_97_16

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comp(15189..16376)
DNA (1188bp) protein (396aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IKL0_KORVE rbh
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48599.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
13_1_20cm_full_scaffold_97_trna_3
unknown

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comp(16518..16590)
DNA (73bp)
transferRNA
13_1_20cm_full_scaffold_97_17
unknown

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comp(16800..17030)
DNA (231bp) protein (77aa)

This feature has no annotations

13_1_20cm_full_scaffold_97_18

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17119..17805
DNA (687bp) protein (229aa)
Peptidoglycan-binding domain 1 protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DBJ5_9BACT
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48600.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
13_1_20cm_full_scaffold_97_19
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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17879..18961
DNA (1083bp) protein (361aa)
Bicupin, oxalate decarboxylase/oxidase n=1 Tax=Schlesneria paludicola RepID=UPI00029A874D
oxalate decarboxylase family bicupin
Bicupin, oxalate decarboxylase family {ECO:0000313|EMBL:AGA31505.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Sing
13_1_20cm_full_scaffold_97_20

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19075..20763
DNA (1689bp) protein (563aa)
glutamate formiminotransferase (EC:2.1.2.5)
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI00037A7348 rbh
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48602.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
13_1_20cm_full_scaffold_97_21

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20922..22157
DNA (1236bp) protein (412aa)
Imidazolonepropionase {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112}; EC=3.5.2.7 {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112};; Imidazolone-5-propionate hydrolase
imidazolonepropionase (EC:3.5.2.7)
Imidazolonepropionase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=HUTI_SOLUE
13_1_20cm_full_scaffold_97_22

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22179..22328
DNA (150bp) protein (50aa)
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48604.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
13_1_20cm_full_scaffold_97_23
unknown

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22501..22620
DNA (120bp) protein (40aa)

This feature has no annotations

13_1_20cm_full_scaffold_97_24

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22617..23954
DNA (1338bp) protein (446aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=77133 spec
Trigger factor n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D1C3_9BACT
trigger factor
13_1_20cm_full_scaffold_97_25

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23951..24652
DNA (702bp) protein (234aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000256|HAMAP-R
endopeptidase Clp (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D1C4_9BACT
13_1_20cm_full_scaffold_97_26

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24695..25948
DNA (1254bp) protein (418aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D1C5_9BACT
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacteri
ATP-dependent Clp protease ATP-binding subunit ClpX
13_1_20cm_full_scaffold_97_27

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26058..27296
DNA (1239bp) protein (413aa)
CinA-like protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZT4_9BACT
CinA-like protein {ECO:0000256|HAMAP-Rule:MF_00226}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
competence/damage-inducible protein CinA
Displaying items 1-30 of 42 in total

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