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13_1_20cm_full_scaffold_98

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_98_1
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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1..1188
DNA (1188bp) protein (396aa)
Phosphoesterase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q027T7_SOLUE
phosphoesterase
Phosphoesterase {ECO:0000313|EMBL:ABJ82720.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibac
13_1_20cm_full_scaffold_98_2
GWB2_Planctomycetes_41_19_curated, Brocadiales, Planctomycetes, Bacteria

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1443..1958
DNA (516bp) protein (172aa)
NTPase; K06928 nucleoside-triphosphatase THEP1 [EC:3.6.1.15] Tax=GWB2_Planctomycetes_41_19_curated
Nucleoside-triphosphatase CTN_0656 n=1 Tax=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) RepID=B9K799_THENN
putative NTPase
13_1_20cm_full_scaffold_98_3
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1938..2687)
DNA (750bp) protein (250aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ARh3 RepID=UPI00037EF4E6 rbh
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein
13_1_20cm_full_scaffold_98_4
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(2812..4620)
DNA (1809bp) protein (603aa)
Methylmalonyl-CoA mutase, large subunit {ECO:0000313|EMBL:EDY15898.1}; EC=5.4.99.2 {ECO:0000313|EMBL:EDY15898.1};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" so
Methylmalonyl-CoA mutase, large subunit n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DCE9_9BACT rbh
methylmalonyl-CoA mutase
13_1_20cm_full_scaffold_98_5
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4617..5786)
DNA (1170bp) protein (390aa)
methylmalonyl-CoA mutase n=1 Tax=Xanthomonas sacchari RepID=UPI000262ADF4
methylmalonyl-CoA mutase, N-terminal domain/subunit Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
methylmalonyl-CoA mutase
13_1_20cm_full_scaffold_98_6

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5857..6612
DNA (756bp) protein (252aa)
3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DCE7_9BACT rbh
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48386.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
13_1_20cm_full_scaffold_98_7

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comp(6673..6888)
DNA (216bp) protein (72aa)
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48385.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
13_1_20cm_full_scaffold_98_8
unknown

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comp(7245..7625)
DNA (381bp) protein (127aa)

This feature has no annotations

13_1_20cm_full_scaffold_98_9

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comp(7827..8195)
DNA (369bp) protein (123aa)
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48383.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein alias=ACD79_3473.2040.23G0002,ACD79_3473.2040.23_2,ACD79_C00480G00002 id=128396 tax=ACD79 species=Opitutus terrae genus=Opitutus taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia organism_group=Chlamydiae organism_desc=Novel, branching deeply from Chlamydiae
hypothetical protein
13_1_20cm_full_scaffold_98_10
unknown

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comp(8182..8814)
DNA (633bp) protein (211aa)

This feature has no annotations

13_1_20cm_full_scaffold_98_11

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9088..10257
DNA (1170bp) protein (390aa)
Glycosyl transferase group 1 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DBN4_9BACT rbh
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49399.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
group 1 glycosyl transferase
13_1_20cm_full_scaffold_98_12
Crinalium epipsammum, Crinalium, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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10362..10913
DNA (552bp) protein (184aa)
Superoxide dismutase (EC:1.15.1.1)
Superoxide dismutase [Cu-Zn] {ECO:0000256|RuleBase:RU000393}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000393};; Flags: Precursor;; TaxID=1173022 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Os
Superoxide dismutase [Cu-Zn] n=1 Tax=Crinalium epipsammum PCC 9333 RepID=K9W528_9CYAN
13_1_20cm_full_scaffold_98_13
Methanosarcina acetivorans, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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11037..11435
DNA (399bp) protein (133aa)
beta/gama crystallin family protein n=1 Tax=Schlesneria paludicola RepID=UPI00029B2611
beta/gama crystallin family protein
Beta/gama crystallin family protein {ECO:0000313|EMBL:AAM05909.1}; TaxID=188937 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Metha
13_1_20cm_full_scaffold_98_14
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11447..12493)
DNA (1047bp) protein (349aa)
D-aspartate oxidase (EC:1.4.3.1)
D-aspartate oxidase n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2Q3A8_KRIFD
D-amino-acid oxidase {ECO:0000313|EMBL:KFE72511.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalang
13_1_20cm_full_scaffold_98_15
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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12544..13635
DNA (1092bp) protein (364aa)
Cyclic dehypoxanthine futalosine synthase {ECO:0000256|HAMAP-Rule:MF_00992}; Short=Cyclic DHFL synthase {ECO:0000256|HAMAP-Rule:MF_00992};; EC=1.21.98.1 {ECO:0000256|HAMAP-Rule:MF_00992};; Dehypoxanth
Radical SAM domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D717_9BACT
Radical SAM domain-containing protein
13_1_20cm_full_scaffold_98_16
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

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13786..16101
DNA (2316bp) protein (772aa)
putative outer membrane protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745AD5 rbh
Outer membrane protein; K07277 outer membrane protein Tax=GWF2_Verrucomicrobia_62_7_curated
Outer membrane protein
13_1_20cm_full_scaffold_98_17
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

16157..16789
DNA (633bp) protein (211aa)
Outer membrane chaperone Skp (OmpH) n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D714_9BACT
Outer membrane chaperone Skp (OmpH) {ECO:0000313|EMBL:EDY17665.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus E
hlpA; Outer membrane protein
13_1_20cm_full_scaffold_98_18
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

16853..17725
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D3H5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY18805.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
13_1_20cm_full_scaffold_98_19
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(17769..18506)
DNA (738bp) protein (246aa)
Peptidoglycan-binding domain 1 protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D3H6_9BACT
Peptidoglycan-binding domain 1 protein {ECO:0000313|EMBL:EDY18806.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavu
podJ; localization factor PodJL
13_1_20cm_full_scaffold_98_20
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(18544..19335)
DNA (792bp) protein (264aa)
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:EDY18807.1}; EC=3.5.1.28 {ECO:0000313|EMBL:EDY18807.1};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source=
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D3H7_9BACT
hypothetical protein
13_1_20cm_full_scaffold_98_21
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(19370..20149)
DNA (780bp) protein (260aa)
20S proteasome A and B subunits n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D3H8_9BACT
20S proteasome A and B subunits {ECO:0000313|EMBL:EDY18808.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
putative proteasome subunit alpha
13_1_20cm_full_scaffold_98_22
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(20146..20970)
DNA (825bp) protein (275aa)
putative proteasome subunit beta (EC:3.4.25.1)
20S proteasome A and B subunits n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D3H9_9BACT
20S proteasome A and B subunits {ECO:0000313|EMBL:EDY18809.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
13_1_20cm_full_scaffold_98_23
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(20970..21179)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D3I0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY18810.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
13_1_20cm_full_scaffold_98_24
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

21326..21805
DNA (480bp) protein (160aa)
Peptidoglycan-binding LysM n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D3I1_9BACT
Peptidoglycan-binding LysM {ECO:0000313|EMBL:EDY18811.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;
peptidoglycan-binding lysin domain-containing protein
13_1_20cm_full_scaffold_98_25
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

21816..22364
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D3I2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY18812.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
13_1_20cm_full_scaffold_98_26
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(22483..24255)
DNA (1773bp) protein (591aa)
msbA; lipid A export ATP-binding/permease protein MsbA (EC:3.6.3.-)
ABC transporter-related protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D206_9BACT
ABC transporter-related protein {ECO:0000313|EMBL:EDY19768.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin
13_1_20cm_full_scaffold_98_27

Not on your lists

24501..26939
DNA (2439bp) protein (813aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002F34B69
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49067.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
13_1_20cm_full_scaffold_98_28

Not on your lists

27563..29521
DNA (1959bp) protein (653aa)
Two-component hybrid sensor and regulator n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89EQ6_BRADU
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49190.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
two-component hybrid sensor and regulator
Displaying 28 items

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