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13_1_20cm_2_scaffold_185

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_185_1

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699..1505
DNA (807bp) protein (269aa)
Conserved archaeal protein n=1 Tax=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) RepID=A2BKT3_HYPBU
Marine sediment metagenome DNA, contig: S03H2_L06909 {ECO:0000313|EMBL:GAH35488.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
hypothetical protein
13_1_20cm_2_scaffold_185_2
R_Deltaproteobacteria_47_10, Deltaproteobacteria, Proteobacteria, Bacteria

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1632..2123
DNA (492bp) protein (164aa)
ribonuclease H Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_47_10_curated
13_1_20cm_2_scaffold_185_3
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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2256..2702
DNA (447bp) protein (149aa)
hypothetical protein Tax=RBG_16_Thaumarchaeota_49_8_curated
13_1_20cm_2_scaffold_185_4
unknown

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2807..3400
DNA (594bp) protein (198aa)

This feature has no annotations

13_1_20cm_2_scaffold_185_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(3522..4199)
DNA (678bp) protein (226aa)
HAD-superfamily hydrolase, subfamily IA, variant 1 n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NG32_ROSCS
HAD family hydrolase; K07025 putative hydrolase of the HAD superfamily Tax=RBG_16_Gemmatimonadetes_66_8_curated
HAD family hydrolase
13_1_20cm_2_scaffold_185_trna_3
unknown

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comp(4754..4883)
DNA (130bp)
transferRNA
13_1_20cm_2_scaffold_185_6
Pyrobaculum neutrophilum, Pyrobaculum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

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5055..6479
DNA (1425bp) protein (475aa)
Major facilitator superfamily MFS_1 n=1 Tax=Pyrobaculum neutrophilum (strain DSM 2338 / JCM 9278 / V24Sta) RepID=B1YAR1_PYRNV
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACB39140.1}; TaxID=444157 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Pyrobaculum.;" source="Pyrobaculum neu
major facilitator transporter
13_1_20cm_2_scaffold_185_7

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6598..8013
DNA (1416bp) protein (472aa)
Aldehyde dehydrogenase (GabD) {ECO:0000313|EMBL:AIF08618.1}; EC=1.2.1.16 {ECO:0000313|EMBL:AIF08618.1};; Flags: Fragment;; TaxID=1456121 species="Archaea; Thaumarchaeota; environmental samples.;" sour
Aldehyde dehydrogenase n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B8X2_9ARCH
aldehyde dehydrogenase
13_1_20cm_2_scaffold_185_8
RBG_16_Archaea_50_20_curated, Archaea

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8030..9157
DNA (1128bp) protein (376aa)
Histone deacetylase superfamily n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CFG1_THET1
histone deacetylase superfamily protein; K04768 acetoin utilization protein AcuC Tax=RBG_16_Archaea_50_20_curated
histone deacetylase superfamily protein
13_1_20cm_2_scaffold_185_9
unknown

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9852..10541
DNA (690bp) protein (230aa)

This feature has no annotations

13_1_20cm_2_scaffold_185_10
unknown

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10770..11399
DNA (630bp) protein (210aa)

This feature has no annotations

13_1_20cm_2_scaffold_185_11
unknown

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11517..12077
DNA (561bp) protein (187aa)

This feature has no annotations

13_1_20cm_2_scaffold_185_trna_1
unknown

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12157..12245
DNA (89bp)
transferRNA
13_1_20cm_2_scaffold_185_12
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(12262..13806)
DNA (1545bp) protein (515aa)
Transporter n=1 Tax=Thermoplasmatales archaeon I-plasma RepID=T0LNB2_9EURY
O-antigen and teichoic acid export protein Tax=RBG_13_Bathyarchaeota_38_9_curated
heteropolysaccharide repeat-containing protein
13_1_20cm_2_scaffold_185_13
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(13895..14866)
DNA (972bp) protein (324aa)
thiamine-monophosphate kinase (EC:2.7.4.16); K00946 thiamine-monophosphate kinase [EC:2.7.4.16] Tax=RBG_13_Bathyarchaeota_46_16b_curated
thiL; thiamine-monophosphate kinase (EC:2.7.4.16)
Thiamine-monophosphate kinase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ICP3_NITGG
13_1_20cm_2_scaffold_185_trna_2
unknown

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14932..15046
DNA (115bp)
transferRNA
13_1_20cm_2_scaffold_185_14
unknown

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15190..15339
DNA (150bp) protein (50aa)

This feature has no annotations

13_1_20cm_2_scaffold_185_15

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comp(15668..16924)
DNA (1257bp) protein (419aa)
Uncharacterized protein n=1 Tax=Thermococcus litoralis DSM 5473 RepID=H3ZKZ6_THELI
Marine sediment metagenome DNA, contig: S03H2_L00917 {ECO:0000313|EMBL:GAH43843.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
hypothetical protein
13_1_20cm_2_scaffold_185_16
unknown

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17095..17379
DNA (285bp) protein (95aa)

This feature has no annotations

13_1_20cm_2_scaffold_185_17
Chlamydomonas reinhardtii, Chlamydomonas, Chlamydomonadales, Chlorophyceae, Chlorophyta, Viridiplantae

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17379..18764
DNA (1386bp) protein (462aa)
UPI0003D6E30E related cluster n=1 Tax=unknown RepID=UPI0003D6E30E
Plus agglutinin {ECO:0000313|EMBL:AAS07044.1}; TaxID=3055 species="Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas.;" source="Chlamydomonas r
hypothetical protein
13_1_20cm_2_scaffold_185_18
Mycobacterium tuberculosis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18846..20021
DNA (1176bp) protein (392aa)
Proline-rich mucin homolog n=1 Tax=Mycobacterium tuberculosis RepID=Q9XDH2_MYCTU
Proline-rich mucin homolog {ECO:0000313|EMBL:AAD41594.1}; TaxID=1773 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.;" source
hypothetical protein
13_1_20cm_2_scaffold_185_19
Thaumarchaeota archaeon SCGC AB-539-E09, Thaumarchaeota, Archaea

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comp(20085..20867)
DNA (783bp) protein (261aa)
Endonuclease NucS {ECO:0000256|HAMAP-Rule:MF_00722}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00722};; TaxID=1198115 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeot
Endonuclease NucS n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7U2L6_9ARCH
putative nuclease of the RecB family
13_1_20cm_2_scaffold_185_20
Grimontia sp. AD028, Grimontia, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20920..21450
DNA (531bp) protein (177aa)
Malonyl-[acyl-carrier protein] O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00835, ECO:0000256|SAAS:SAAS00055581}; Short=Malonyl-ACP O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00835};; EC=2.1.1.
Malonyl-[acyl-carrier protein] O-methyltransferase n=1 Tax=Grimontia sp. AK16 RepID=R1H0G9_9GAMM
Displaying 23 items

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