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13_1_20cm_2_scaffold_260

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_260_1
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

1..1053
DNA (1053bp) protein (351aa)
butyryl-CoA dehydrogenase (EC:1.3.8.1)
Butyryl-CoA dehydrogenase n=1 Tax=Caloramator australicus RC3 RepID=I7LJS8_9CLOT
acyl-CoA dehydrogenase domain-containing protein Tax=RBG_16_Euryarchaeota_41_19_curated
13_1_20cm_2_scaffold_260_2
Streptomyces glaucescens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1061..1591)
DNA (531bp) protein (177aa)
hypothetical protein n=1 Tax=Streptomyces sp. BoleA5 RepID=UPI00035C959E
Acetyltransferase, GNAT family protein {ECO:0000313|EMBL:AIR99806.1}; TaxID=1907 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces glaucescen
acetyltransferase, GNAT family protein
13_1_20cm_2_scaffold_260_3
Pseudothermotoga lettingae, Pseudothermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

1974..2645
DNA (672bp) protein (224aa)
TrkA-N domain protein n=1 Tax=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) RepID=A8F5M5_THELT
TrkA-N domain protein {ECO:0000313|EMBL:ABV33459.1}; TaxID=416591 species="Bacteria; Thermotogae; Thermotogales; Thermotogaceae; Pseudothermotoga.;" source="Pseudothermotoga lettingae (strain ATCC BAA
TrkA domain-containing protein
13_1_20cm_2_scaffold_260_4
Thermofilum sp. 1910b, Thermofilum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

2670..3425
DNA (756bp) protein (252aa)
hypothetical protein n=1 Tax=Crenarchaeota archaeon SCGC AAA471-B05 RepID=UPI00037A560B
Uncharacterized protein {ECO:0000313|EMBL:AGT35766.1}; TaxID=1365176 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermofilaceae; Thermofilum.;" source="Thermofilum sp. 1910b.;"
Small-conductance mechanosensitive channel
13_1_20cm_2_scaffold_260_5
Thermofilum sp. 1910b, Thermofilum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(3405..4835)
DNA (1431bp) protein (477aa)
Uncharacterized protein n=1 Tax=Thermofilum sp. 1910b RepID=S5ZWY7_9CREN rbh
Uncharacterized protein {ECO:0000313|EMBL:AGT35764.1}; TaxID=1365176 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermofilaceae; Thermofilum.;" source="Thermofilum sp. 1910b.;"
hypothetical protein
13_1_20cm_2_scaffold_260_6
unknown

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5080..5286
DNA (207bp) protein (69aa)

This feature has no annotations

13_1_20cm_2_scaffold_260_7
CSP1_8_Deltaproteobacteria, 43F-1404R, Deltaproteobacteria, Proteobacteria, Bacteria

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5407..5826
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4CEK7_DESTA
hypothetical protein Tax=CSP1_8_Deltaproteobacteria
hypothetical protein
13_1_20cm_2_scaffold_260_8
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(6009..7592)
DNA (1584bp) protein (528aa)
Methylmalonyl-CoA mutase, large subunit {ECO:0000313|EMBL:AFU59425.1}; EC=5.4.99.2 {ECO:0000313|EMBL:AFU59425.1};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; N
mut; methylmalonyl-CoA mutase large subunit (EC:5.4.99.2)
Methylmalonyl-CoA mutase, large subunit n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHK0_NITGG
13_1_20cm_2_scaffold_260_9
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(7585..8541)
DNA (957bp) protein (319aa)
lysine arginine ornithine transport system kinase; K07588 LAO/AO transport system kinase [EC:2.7.-.-] Tax=RBG_13_Bathyarchaeota_46_16b_curated
Uncharacterized protein n=2 Tax=Pyrococcus furiosus RepID=I6TYW0_9EURY
hypothetical protein
13_1_20cm_2_scaffold_260_10
RBG_16_Archaea_50_20_curated, Archaea

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8648..10405
DNA (1758bp) protein (586aa)
methylmalonyl-CoA mutase, alpha subunit; K01848 methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] Tax=RBG_16_Archaea_50_20_curated
Probable methylmalonyl-CoA mutase, alpha subunit, N-terminus n=1 Tax=Thermoplasma acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165) RepID=Q9HKY1_THEAC
methylmalonyl-CoA mutase subunit alpha
13_1_20cm_2_scaffold_260_11
Thermotoga sp. RQ2, Thermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

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10452..11018
DNA (567bp) protein (189aa)
NUDIX hydrolase n=2 Tax=Thermotoga RepID=B1LCR4_THESQ
NUDIX hydrolase {ECO:0000313|EMBL:ACB09973.1}; TaxID=126740 species="Bacteria; Thermotogae; Thermotogales; Thermotogaceae; Thermotoga.;" source="Thermotoga sp. (strain RQ2).;"
NUDIX hydrolase
13_1_20cm_2_scaffold_260_12
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(11251..11949)
DNA (699bp) protein (233aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC15785.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera v
13_1_20cm_2_scaffold_260_13
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(12077..12565)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IF48_NITGG
Uncharacterized protein {ECO:0000313|EMBL:AIC15785.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera v
hypothetical protein
13_1_20cm_2_scaffold_260_14
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(12573..13022)
DNA (450bp) protein (150aa)
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_2_scaffold_260_15
unknown

Not on your lists

13052..13378
DNA (327bp) protein (109aa)

This feature has no annotations

13_1_20cm_2_scaffold_260_16
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(13318..13668)
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Psychromonas ossibalaenae RepID=UPI00035DCC56
Marine sediment metagenome DNA, contig: S03H2_C02230 Tax=RBG_16_Archaea_50_20_curated
13_1_20cm_2_scaffold_260_17
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

Not on your lists

comp(13756..14667)
DNA (912bp) protein (304aa)
Purine nucleosidase {ECO:0000313|EMBL:BAJ48099.1}; EC=3.2.2.1 {ECO:0000313|EMBL:BAJ48099.1};; TaxID=311458 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Candidatus Caldiarchaeum.;" so
purine nucleosidase (EC:3.2.2.1)
Purine nucleosidase n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N730_9ARCH
13_1_20cm_2_scaffold_260_18
Metallosphaera yellowstonensis, Metallosphaera, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(14711..15379)
DNA (669bp) protein (223aa)
Nicotinamidase-like amidase n=1 Tax=Metallosphaera yellowstonensis MK1 RepID=H2C2B2_9CREN
Nicotinamidase-like amidase {ECO:0000313|EMBL:EHP70383.1}; Flags: Precursor;; TaxID=671065 species="Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Metallosphaera.;" source="Metallo
isochorismatase hydrolase
13_1_20cm_2_scaffold_260_19
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

15477..16655
DNA (1179bp) protein (393aa)
Putative 2-octaprenyl-3-methyl-6-methoxy-1, 4-benzoquinol hydroxylase {ECO:0000313|EMBL:CBK41555.1}; EC=1.14.13.- {ECO:0000313|EMBL:CBK41555.1};; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospir
putative 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase (EC:1.14.13.-)
Putative 2-octaprenyl-3-methyl-6-methoxy-1, 4-benzoquinol hydroxylase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PE96_9BACT
13_1_20cm_2_scaffold_260_20

Not on your lists

16775..17086
DNA (312bp) protein (104aa)
Marine sediment metagenome DNA, contig: S06H3_S19374 {ECO:0000313|EMBL:GAI55095.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
13_1_20cm_2_scaffold_260_21
Thermoplasmatales archaeon I-plasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

17445..18569
DNA (1125bp) protein (375aa)
MFS transporter n=1 Tax=Thermoplasmatales archaeon I-plasma RepID=T0MV78_9EURY
MFS transporter {ECO:0000313|EMBL:EQB65280.1}; TaxID=667138 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; environmental samples.;" source="Thermoplasmatales archaeon I-plasma.;"
major facilitator superfamily protein
13_1_20cm_2_scaffold_260_22
Rhodococcus jostii, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18624..19157)
DNA (534bp) protein (178aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037F40B4
Uncharacterized protein {ECO:0000313|EMBL:ABG99985.1}; TaxID=101510 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus jostii (strain RHA1).;"
hypothetical protein
13_1_20cm_2_scaffold_260_23
Pyrolobus fumarii, Pyrolobus, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(19175..19714)
DNA (540bp) protein (180aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01032}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01032};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; Isopropylmalate is
3-isopropylmalate dehydratase small subunit n=1 Tax=Pyrolobus fumarii (strain DSM 11204 / 1A) RepID=G0ECA9_PYRF1
3-isopropylmalate dehydratase, small subunit
13_1_20cm_2_scaffold_260_24
Ignicoccus hospitalis, Ignicoccus, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(19711..20868)
DNA (1158bp) protein (386aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01027}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01027};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; Isopropylmalate is
3-isopropylmalate dehydratase large subunit n=1 Tax=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) RepID=A8AB09_IGNH4
3-isopropylmalate dehydratase large subunit
13_1_20cm_2_scaffold_260_25
unknown

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21038..21346
DNA (309bp) protein (103aa)

This feature has no annotations

Displaying 25 items

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