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13_1_20cm_2_scaffold_29

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_29_1
Methanocella conradii, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

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61..990
DNA (930bp) protein (310aa)
pyrD; dihydroorotate oxidase B, catalytic subunit (EC:1.3.98.1)
Dihydroorotate dehydrogenase n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I5V0_METCZ
Dihydroorotate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00224}; Short=DHOD {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHODase {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHOdehase {ECO:0000256|HAMAP-Rule
13_1_20cm_2_scaffold_29_2
unknown

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comp(993..1127)
DNA (135bp) protein (45aa)

This feature has no annotations

13_1_20cm_2_scaffold_29_3
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

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comp(1209..1727)
DNA (519bp) protein (173aa)
GAF domain protein n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L0G4_THERP
GAF domain protein {ECO:0000313|EMBL:ACM05437.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 275
GAF domain-containing protein
13_1_20cm_2_scaffold_29_4
RBG_16_Archaea_50_20_curated, Archaea

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1790..3526
DNA (1737bp) protein (579aa)
hypothetical protein n=1 Tax=Sulfobacillus thermosulfidooxidans RepID=UPI00031E1BA7
hypothetical protein; K06888 Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_20cm_2_scaffold_29_5
Symbiobacterium thermophilum, Symbiobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3603..5159
DNA (1557bp) protein (519aa)
Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67Q21_SYMTH
Putative uncharacterized protein {ECO:0000313|EMBL:BAD40222.1}; TaxID=292459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Symbiobacteriaceae; Symbiobacterium.;" source="Symbiobacterium th
hypothetical protein
13_1_20cm_2_scaffold_29_6
RBG_16_Archaea_50_20_curated, Archaea

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comp(5156..6616)
DNA (1461bp) protein (487aa)
inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205); K00088 IMP dehydrogenase [EC:1.1.1.205] Tax=RBG_16_Archaea_50_20_curated
inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Korarchaeum cryptofilum (strain OPF8) RepID=IMDH_KORCO rbh
13_1_20cm_2_scaffold_29_7
Methanocaldococcus infernus, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

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6845..8089
DNA (1245bp) protein (415aa)
Adenosylhomocysteinase {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548};; S-adenosyl-L-homocysteine hydrola
adenosylhomocysteinase (EC:3.3.1.1)
Adenosylhomocysteinase n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VRX5_METIM rbh
13_1_20cm_2_scaffold_29_8
RBG_16_Archaea_50_20_curated, Archaea

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8330..9139
DNA (810bp) protein (270aa)
hypothetical protein n=1 Tax=Pseudomonas sp. CBZ-4 RepID=UPI000344CFCE
ssuC1; aliphatic sulfonates ABC transporter permease SsuC Tax=RBG_16_Archaea_50_20_curated
ABC transporter permease
13_1_20cm_2_scaffold_29_9
RBG_16_Archaea_50_20_curated, Archaea

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9144..9962
DNA (819bp) protein (273aa)
Uncharacterized ABC transporter ATP-binding protein MJ0412 n=1 Tax=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) RepID=Y412_METJA
taurine-transporting AtPase; K02049 NitT/TauT family transport system ATP-binding protein Tax=RBG_16_Archaea_50_20_curated
nitrate transporter protein CmpC
13_1_20cm_2_scaffold_29_10
unknown

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9991..10542
DNA (552bp) protein (184aa)

This feature has no annotations

13_1_20cm_2_scaffold_29_11
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

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comp(10468..12222)
DNA (1755bp) protein (585aa)
peptidase M6, immune inhibitor A; K09607 immune inhibitor A [EC:3.4.24.-] Tax=RBG_16_Chloroflexi_54_18_curated
M6 family metalloprotease domain-containing protein (EC:3.4.24.-)
hypothetical protein n=1 Tax=Crenarchaeota archaeon SCGC AAA471-B05 RepID=UPI0003644896
13_1_20cm_2_scaffold_29_12
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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12459..14042
DNA (1584bp) protein (528aa)
UPF0219 protein Mfer_0083 n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GWZ8_METFV
hydroxymethylglutaryl-CoA synthase Tax=RBG_13_Bathyarchaeota_38_9_curated
hydroxymethylglutaryl-CoA synthase
13_1_20cm_2_scaffold_29_13
Bacillus sp. 1NLA3E, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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14101..15261
DNA (1161bp) protein (387aa)
Acyl-CoA dehydrogenase n=1 Tax=Bacillus sp. 1NLA3E RepID=N0AY79_9BACI
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:AGK56069.1}; TaxID=666686 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. 1NLA3E.;"
acyl-CoA dehydrogenase
13_1_20cm_2_scaffold_29_14
unknown

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15705..15914
DNA (210bp) protein (70aa)

This feature has no annotations

13_1_20cm_2_scaffold_29_15
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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comp(15967..16221)
DNA (255bp) protein (85aa)
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI000380515C
hypothetical protein
Tax=RBG_16_Thaumarchaeota_49_8_curated
13_1_20cm_2_scaffold_29_16
RBG_16_Archaea_50_20_curated, Archaea

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comp(16283..17644)
DNA (1362bp) protein (454aa)
pyridoxal-phosphate dependent TrpB-like protein; K06001 tryptophan synthase beta chain [EC:4.2.1.20] Tax=RBG_16_Archaea_50_20_curated
Tryptophan synthase beta chain n=1 Tax=Thermoplasmatales archaeon I-plasma RepID=T0MXK7_9EURY
tryptophan synthase like subunit beta
13_1_20cm_2_scaffold_29_17
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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17706..18218
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000367ACEC
amino acid-binding ACT domain-containing protein; K07103 Tax=RBG_13_Bathyarchaeota_38_9_curated
amino acid-binding ACT domain-containing protein
13_1_20cm_2_scaffold_29_18
RBG_16_Archaea_50_20_curated, Archaea

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18303..19070
DNA (768bp) protein (256aa)
Tax=RBG_16_Archaea_50_20_curated
13_1_20cm_2_scaffold_29_19
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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19057..19644
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Aigarchaeota archaeon SCGC AAA471-G05 RepID=UPI00037F1D50
hsp20; heat shock protein Hsp20 Tax=RBG_13_Bathyarchaeota_38_9_curated
hsp20-4; heat shock protein Hsp20
13_1_20cm_2_scaffold_29_20
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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19741..20943
DNA (1203bp) protein (401aa)
Peptidase M24 n=1 Tax=Vulcanisaeta distributa (strain DSM 14429 / JCM 11212 / NBRC 100878 / IC-017) RepID=E1QPW0_VULDI
peptidase M24 Tax=RBG_13_Bathyarchaeota_46_16b_curated
peptidase M24
13_1_20cm_2_scaffold_29_21
RBG_16_Archaea_50_20_curated, Archaea

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comp(20984..21553)
DNA (570bp) protein (190aa)
endA1; tRNA-splicing endonuclease (EC:3.1.27.9) Tax=RBG_16_Archaea_50_20_curated
tRNA-intron endonuclease (EC:4.6.1.16)
tRNA intron endonuclease n=1 Tax=Candidatus Nitrosoarchaeum limnia SFB1 RepID=F3KJR1_9ARCH
13_1_20cm_2_scaffold_29_22
RBG_16_Archaea_50_20_curated, Archaea

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comp(21562..22221)
DNA (660bp) protein (220aa)
Putative uncharacterized protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N8B5_9ARCH
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_20cm_2_scaffold_29_23
RBG_16_Archaea_50_20_curated, Archaea

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comp(22286..24055)
DNA (1770bp) protein (590aa)
glycyl-tRNA synthetase; K01880 glycyl-tRNA synthetase [EC:6.1.1.14] Tax=RBG_16_Archaea_50_20_curated
Glycine--tRNA ligase n=1 Tax=Pyrolobus fumarii (strain DSM 11204 / 1A) RepID=G0ECJ1_PYRF1
glycyl-tRNA synthetase
13_1_20cm_2_scaffold_29_24
RBG_16_Archaea_50_20_curated, Archaea

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comp(24107..24328)
DNA (222bp) protein (74aa)
DNA-directed RNA polymerase, subunit P; K03059 DNA-directed RNA polymerase subunit P [EC:2.7.7.6]
DNA-directed RNA polymerase subunit P n=1 Tax=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) RepID=A2BIW9_HYPBU
Tax=RBG_16_Archaea_50_20_curated
13_1_20cm_2_scaffold_29_25
unknown

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comp(24341..27094)
DNA (2754bp) protein (918aa)

This feature has no annotations

13_1_20cm_2_scaffold_29_26
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(27205..27435)
DNA (231bp) protein (77aa)
Small nuclear ribonucleoprotein n=1 Tax=Cenarchaeum symbiosum (strain A) RepID=A0RZA4_CENSY
small nuclear ribonucleoprotein Tax=RBG_13_Bathyarchaeota_38_9_curated
small nuclear ribonucleoprotein
13_1_20cm_2_scaffold_29_27
RBG_16_Archaea_50_20_curated, Archaea

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27512..28000
DNA (489bp) protein (163aa)
PUA domain containing protein n=1 Tax=Methanocaldococcus fervens (strain DSM 4213 / JCM 157852 / AG86) RepID=C7P9G5_METFA
putative RNA-binding protein; K07575 PUA domain protein Tax=RBG_16_Archaea_50_20_curated
putative RNA-binding protein
13_1_20cm_2_scaffold_29_28
RBG_16_Archaea_50_20_curated, Archaea

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28112..28438
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=uncultured archaeon RepID=G3C9I1_9ARCH
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
Protein of unknown function (DUF552)
13_1_20cm_2_scaffold_29_29
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(28435..30354)
DNA (1920bp) protein (640aa)
Cleavage and polyadenylation specficity factor subunit homolog n=1 Tax=Thermococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) RepID=Q5JH24_THEKO
kh-domain/beta-lactamase-domain protein; K07041 Tax=RBG_13_Bathyarchaeota_38_9_curated
hypothetical protein
13_1_20cm_2_scaffold_29_30
RBG_16_Archaea_50_20_curated, Archaea

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comp(30407..30943)
DNA (537bp) protein (179aa)
proteasome subunit beta (EC:3.4.25.1); K03433 proteasome beta subunit [EC:3.4.25.1] Tax=RBG_16_Archaea_50_20_curated
Proteasome subunit beta n=1 Tax=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) RepID=PSB_METTH
proteasome subunit beta
Displaying items 1-30 of 44 in total

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