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13_1_20cm_2_scaffold_30

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_30_1
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(3..497)
DNA (495bp) protein (165aa)
ATP-dependent DNA ligase (EC:6.5.1.1)
hypothetical protein n=1 Tax=crenarchaeote SCGC AAA261-N23 RepID=UPI000380991D
ATP-dependent DNA ligase I Tax=RBG_13_Bathyarchaeota_38_9_curated
13_1_20cm_2_scaffold_30_2
unknown

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981..1496
DNA (516bp) protein (172aa)

This feature has no annotations

13_1_20cm_2_scaffold_30_3
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

1493..2095
DNA (603bp) protein (201aa)
hypothetical protein n=1 Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI0003727633
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
13_1_20cm_2_scaffold_30_4
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(2092..2688)
DNA (597bp) protein (199aa)
Metal dependent phosphohydrolase n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CWS1_9ARCH
Metal dependent phosphohydrolase {ECO:0000313|EMBL:EGP93723.1}; TaxID=1001994 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Ni
Metal dependent phosphohydrolase
13_1_20cm_2_scaffold_30_5
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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2731..2967
DNA (237bp) protein (79aa)
Tax=RBG_13_Bathyarchaeota_38_9_curated
13_1_20cm_2_scaffold_30_6
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

3004..3438
DNA (435bp) protein (145aa)
Putative uncharacterized protein n=1 Tax=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) RepID=A3DN66_STAMF
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_20cm_2_scaffold_30_7
Halothermothrix orenii, Halothermothrix, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3717..4253
DNA (537bp) protein (179aa)
Tyrosine recombinase XerC n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=B8CX42_HALOH
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=373903 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halothermothrix.;" source="Halothermothrix oreni
phage integrase family protein
13_1_20cm_2_scaffold_30_8
unknown

Not on your lists

4520..4804
DNA (285bp) protein (95aa)

This feature has no annotations

13_1_20cm_2_scaffold_30_9
RBG_16_Bathyarchaeota_57_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(4801..5331)
DNA (531bp) protein (177aa)
cytidyltransferase (EC:2.7.7.3) Tax=RBG_16_Bathyarchaeota_57_9_curated
coaD; phosphopantetheine adenylyltransferase (EC:2.7.7.3)
Cytidyltransferase-related domain protein n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GWL3_METFV
13_1_20cm_2_scaffold_30_trna_1
unknown

Not on your lists

comp(5503..5637)
DNA (135bp)
transferRNA
13_1_20cm_2_scaffold_30_10
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

5795..6769
DNA (975bp) protein (325aa)
Transcription initiation factor IIB n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7U4W7_9ARCH
transcription factor TFIIB cyclin-related protein; K03124 transcription initiation factor TFIIB Tax=RBG_13_Bathyarchaeota_38_9_curated
tfb1; transcription initiation factor IIB
13_1_20cm_2_scaffold_30_11
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

7490..7735
DNA (246bp) protein (82aa)
Protein translation factor SUI1 homolog n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N3C4_9ARCH
translation initiation factor aSUI1 Tax=RBG_13_Bathyarchaeota_38_9_curated
translation initiation factor SUI1
13_1_20cm_2_scaffold_30_12
CG_Pacearch_01, Pacearchaeota, Archaea

Not on your lists

comp(7968..8927)
DNA (960bp) protein (320aa)
dTDP-glucose 4,6-dehydratase; K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] Tax=CG_Pacearch_01
dTDP-glucose 4,6-dehydratase n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8P1M1_GRAMM
dTDP-glucose 4,6-dehydratase
13_1_20cm_2_scaffold_30_13
R_OD1_Giovannonibacteria_45_23, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(8924..9577)
DNA (654bp) protein (218aa)
Nucleotidyl transferase n=1 Tax=Caldivirga maquilingensis (strain ATCC 700844 / DSM 13496 / JCM 10307 / IC-167) RepID=A8MDH4_CALMQ
nucleotidyl transferase Tax=RIFCSPHIGHO2_01_FULL_OD1_Giovannonibacteria_45_23_curated
nucleotidyl transferase
13_1_20cm_2_scaffold_30_14
Thermofilum sp. 1807-2, Thermofilum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

10016..10276
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Thermofilum pendens (strain Hrk 5) RepID=A1RX12_THEPD
Uncharacterized protein {ECO:0000313|EMBL:AKG39224.1}; TaxID=1550241 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermofilaceae; Thermofilum.;" source="Thermofilum sp. 1807-2.;"
hypothetical protein
13_1_20cm_2_scaffold_30_15
Thermoplasmatales archaeon SCGC AB-539-N05, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(10330..11196)
DNA (867bp) protein (289aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=1198116 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source
apbA; 2-dehydropantoate 2-reductase (EC:1.1.1.169)
2-dehydropantoate 2-reductase n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7TAP9_9EURY
13_1_20cm_2_scaffold_30_16
RBG_16_Deltaproteobacteria_50_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11255..12124)
DNA (870bp) protein (290aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11); K00606 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] Tax=RBG_16_Deltaproteobacteria_50_11_curated
3-methyl-2-oxobutanoate hydroxymethyltransferase (Fragment) n=1 Tax=Heliobacillus mobilis RepID=Q8GDR8_HELMO
3-methyl-2-oxobutanoate hydroxymethyltransferase
13_1_20cm_2_scaffold_30_17
Thermogladius cellulolyticus, Thermogladius, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(12127..12813)
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Thermogladius cellulolyticus (strain 1633) RepID=I3TFJ4_THEC1
Uncharacterized protein {ECO:0000313|EMBL:AFK51532.1}; TaxID=1184251 species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Desulfurococcaceae; Thermogladius.;" source="Thermogladius cellul
hypothetical protein
13_1_20cm_2_scaffold_30_18
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(12876..13775)
DNA (900bp) protein (300aa)
Putative GHMP kinase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGS5_NITGG
GHMP kinase Tax=RBG_13_Bathyarchaeota_46_16b_curated
GHMP kinase
13_1_20cm_2_scaffold_30_19
Burkholderia multivorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14126..14740
DNA (615bp) protein (205aa)
Double zinc ribbon domain protein n=1 Tax=Burkholderia multivorans CF2 RepID=J4JK37_9BURK
13_1_20cm_2_scaffold_30_20
unknown

Not on your lists

15187..15372
DNA (186bp) protein (62aa)

This feature has no annotations

13_1_20cm_2_scaffold_30_21
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

15654..16667
DNA (1014bp) protein (338aa)
nucleotidyl transferase; K00966 mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] Tax=RBG_16_Bathyarchaeota_48_13_curated
Nucleotidyl transferase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AVJ3_RUBXD
nucleotidyl transferase
13_1_20cm_2_scaffold_30_22
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

16690..18045
DNA (1356bp) protein (452aa)
pgm-1; alpha-phosphoglucomutase / phosphomannomutase (EC:5.4.2.8 5.4.2.2); K15778 phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] Tax=RBG_13_Bathyarchaeota_38_9_curated
Phosphomannomutase n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7TA45_9ARCH
phosphoglucosamine mutase
13_1_20cm_2_scaffold_30_23
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

comp(18607..19680)
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJF7_NITGG
hypothetical protein Tax=RBG_16_Bathyarchaeota_48_13_curated
hypothetical protein
13_1_20cm_2_scaffold_30_24
unknown

Not on your lists

19928..21235
DNA (1308bp) protein (436aa)

This feature has no annotations

13_1_20cm_2_scaffold_30_25
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

21232..22185
DNA (954bp) protein (318aa)
hypothetical protein n=1 Tax=crenarchaeote SCGC AAA261-L14 RepID=UPI000362A8E6
dehydrogenase Tax=RBG_16_Bathyarchaeota_48_13_curated
dehydrogenase
13_1_20cm_2_scaffold_30_26
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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22253..22525
DNA (273bp) protein (91aa)
Uncharacterized protein family UPF0434/Trm112 n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ICD1_NITGG
hypothetical protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
uncharacterized protein family UPF0434/Trm112
13_1_20cm_2_scaffold_30_27

Not on your lists

comp(22609..23694)
DNA (1086bp) protein (362aa)
ABC-type branched-chain amino acid transport system, permease component n=1 Tax=Korarchaeum cryptofilum (strain OPF8) RepID=B1L7L9_KORCO
Uncharacterized protein {ECO:0000313|EMBL:KKL72215.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
branched-chain amino acid ABC transporter permease
13_1_20cm_2_scaffold_30_28
Archaeoglobus veneficus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

comp(23738..24352)
DNA (615bp) protein (205aa)
Branched-chain amino acid ABC transporter permease n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6NBE6_9ARCH
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AEA46832.1}; TaxID=693661 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="A
ABC transporter permease
13_1_20cm_2_scaffold_30_29
unknown

Not on your lists

24393..24557
DNA (165bp) protein (55aa)

This feature has no annotations

Displaying items 1-30 of 49 in total

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