ggKbase home page

13_1_20cm_2_scaffold_4740

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_4740_1
Methanosarcina acetivorans, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

161..1105
DNA (945bp) protein (315aa)
DNA-3-methyladenine glycosylase II n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TL35_METAC
DNA-3-methyladenine glycosylase II {ECO:0000313|EMBL:AAM06578.1}; TaxID=188937 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methan
alkA; DNA-3-methyladenine glycosylase II
13_1_20cm_2_scaffold_4740_2
Candidatus Micrarchaeum acidiphilum, Candidatus Micrarchaeum, Parvarchaeota, Archaea

Not on your lists

1045..1659
DNA (615bp) protein (205aa)
Putative uncharacterized protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DIQ0_9EURY
Putative uncharacterized protein {ECO:0000313|EMBL:EET89824.1}; TaxID=425595 species="Archaea; Parvarchaeota; Candidatus Micrarchaeum.;" source="Candidatus Micrarchaeum acidiphilum ARMAN-2.;"
shikimate kinase I
13_1_20cm_2_scaffold_4740_3
Caldisphaera lagunensis, Caldisphaera, Acidilobales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

1730..3022
DNA (1293bp) protein (431aa)
Uncharacterized protein n=1 Tax=Caldisphaera lagunensis (strain DSM 15908 / JCM 11604 / IC-154) RepID=L0ACF1_CALLD
Uncharacterized protein {ECO:0000313|EMBL:AFZ70725.1}; Flags: Precursor;; TaxID=1056495 species="Archaea; Crenarchaeota; Thermoprotei; Acidilobales; Caldisphaeraceae; Caldisphaera.;" source="Caldispha
hypothetical protein
13_1_20cm_2_scaffold_4740_4
unknown

Not on your lists

comp(3052..3243)
DNA (192bp) protein (64aa)

This feature has no annotations

13_1_20cm_2_scaffold_4740_5
unknown

Not on your lists

comp(3679..3849)
DNA (171bp) protein (57aa)

This feature has no annotations

13_1_20cm_2_scaffold_4740_6
unknown

Not on your lists

comp(4009..4326)
DNA (318bp) protein (106aa)

This feature has no annotations

13_1_20cm_2_scaffold_4740_7
unknown

Not on your lists

comp(4524..4622)
DNA (99bp) protein (33aa)

This feature has no annotations

13_1_20cm_2_scaffold_4740_8
Methanocella paludicola, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

4638..5240
DNA (603bp) protein (201aa)
Putative NADPH:quinone oxidoreductase n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1Z2Q3_METPS
Putative NADPH:quinone oxidoreductase {ECO:0000313|EMBL:BAI62975.1}; TaxID=304371 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanoce
putative NADPH:quinone oxidoreductase
13_1_20cm_2_scaffold_4740_9
unknown

Not on your lists

comp(5285..5671)
DNA (387bp) protein (129aa)

This feature has no annotations

13_1_20cm_2_scaffold_4740_10
Archaeoglobus sulfaticallidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

5874..7187
DNA (1314bp) protein (438aa)
Sodium/proton antiporter, CPA1 family n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BNM4_9EURY
Sodium/proton antiporter, CPA1 family {ECO:0000313|EMBL:AGK61925.1}; TaxID=387631 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglob
sodium/proton antiporter, CPA1 family
13_1_20cm_2_scaffold_4740_11
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(7224..7658)
DNA (435bp) protein (145aa)
Nudix 7..137 Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
NUDIX hydrolase domain alias=gwf1_scaffold_68_42 id=5102312 tax=WS6_GWF1_36_7 organism_desc=RuBisCO project
13_1_20cm_2_scaffold_4740_12
RBG_16_RIF05_58_8_curated, RIF5, Bacteria

Not on your lists

7752..8231
DNA (480bp) protein (160aa)
GCN5-related N-acetyltransferase n=1 Tax=Methanoplanus petrolearius (strain DSM 11571 / OCM 486 / SEBR 4847) RepID=E1RDS9_METP4
GCN5-like N-acetyltransferase Tax=RBG_16_RIF05_58_8_curated
GCN5-like N-acetyltransferase
13_1_20cm_2_scaffold_4740_13
unknown

Not on your lists

comp(8256..8687)
DNA (432bp) protein (144aa)

This feature has no annotations

13_1_20cm_2_scaffold_4740_14
unknown

Not on your lists

8842..9249
DNA (408bp) protein (136aa)

This feature has no annotations

13_1_20cm_2_scaffold_4740_15

Not on your lists

comp(9293..10471)
DNA (1179bp) protein (393aa)
Acyl-CoA dehydrogenase (ACADM, acd) {ECO:0000313|EMBL:AIF00349.1}; EC=1.3.8.7 {ECO:0000313|EMBL:AIF00349.1};; TaxID=1456000 species="Archaea; Thaumarchaeota; environmental samples.;" source="unculture
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI00036C819F rbh
acyl-CoA dehydrogenase domain-containing protein
13_1_20cm_2_scaffold_4740_16

Not on your lists

10550..10939
DNA (390bp) protein (130aa)
Probable divalent-cation tolerance protein n=1 Tax=uncultured archaeon RepID=D1J918_9ARCH
Probable divalent-cation tolerance protein {ECO:0000313|EMBL:CBH38598.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
putative divalent ion tolerance protein
13_1_20cm_2_scaffold_4740_17
Methanosarcina horonobensis, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

11539..12162
DNA (624bp) protein (208aa)
Dihydrofolate reductase {ECO:0000313|EMBL:AKB78925.1}; EC=1.5.1.3 {ECO:0000313|EMBL:AKB78925.1};; TaxID=1434110 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae;
Uncharacterized protein n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MFP1_9EURY
hypothetical protein
13_1_20cm_2_scaffold_4740_18
unknown

Not on your lists

comp(12571..12741)
DNA (171bp) protein (57aa)

This feature has no annotations

13_1_20cm_2_scaffold_4740_19
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

13151..13378
DNA (228bp) protein (76aa)
Tax=RBG_16_Archaea_50_20_curated
Displaying 19 items

View Taxonomy