ggKbase home page

13_1_20cm_2_scaffold_9

Search features with annotation key words

Displaying items 1-30 of 91 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_9_1
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(92..874)
DNA (783bp) protein (261aa)
Glycosyltransferase n=1 Tax=mine drainage metagenome RepID=T0ZGI0_9ZZZZ
glycosyl transferase Tax=RBG_13_Bathyarchaeota_46_16b_curated
glycosyl transferase
13_1_20cm_2_scaffold_9_2
unknown

Not on your lists

comp(898..4014)
DNA (3117bp) protein (1039aa)

This feature has no annotations

13_1_20cm_2_scaffold_9_3
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

4434..5450
DNA (1017bp) protein (339aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CAJ8_SPHTD
NAD-dependent epimerase/dehydratase Tax=RBG_13_Bathyarchaeota_46_16b_curated
NAD-dependent epimerase/dehydratase
13_1_20cm_2_scaffold_9_4
uncultured marine crenarchaeote E6-3G, Crenarchaeota, Archaea

Not on your lists

comp(5784..7241)
DNA (1458bp) protein (486aa)
Glycosyltransferase n=1 Tax=uncultured marine crenarchaeote E6-3G RepID=G9BAK9_9CREN
Glycosyltransferase {ECO:0000313|EMBL:ADP09425.1}; TaxID=907719 species="Archaea; Crenarchaeota; miscellaneous Crenarchaeota group; environmental samples.;" source="uncultured marine crenarchaeote E6-
family 2 glycosyl transferase
13_1_20cm_2_scaffold_9_5
Candidatus Nitrosopumilus koreensis, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

7424..7936
DNA (513bp) protein (171aa)
D,D-heptose 1,7-bisphosphate phosphatase {ECO:0000256|PIRNR:PIRNR004682}; EC=3.1.3.- {ECO:0000256|PIRNR:PIRNR004682};; TaxID=1229908 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilace
D,D-heptose 1,7-bisphosphate phosphatase n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B697_9ARCH
histidinol-phosphate phosphatase family protein
13_1_20cm_2_scaffold_9_6
RBG_13_Chloroflexi_54_8_curated, Chloroflexi, Bacteria

Not on your lists

7943..8956
DNA (1014bp) protein (338aa)
sugar kinase; K07031 D-glycero-alpha-D-manno-heptose-7-phosphate kinase [EC:2.7.1.168] Tax=RBG_13_Chloroflexi_54_8_curated
GHMP kinase, N-terminal domain protein n=1 Tax=Anaerobaculum hydrogeniformans ATCC BAA-1850 RepID=D3L027_9BACT
Predicted kinase related to galactokinase and mevalonate kinase
13_1_20cm_2_scaffold_9_7
RBG_16_Chloroflexi_50_11_curated, Chloroflexi, Bacteria

Not on your lists

8970..9611
DNA (642bp) protein (214aa)
sugar isomerase (SIS); K03271 D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] Tax=RBG_16_Chloroflexi_50_11_curated
Phosphoheptose isomerase n=1 Tax=Aquifex aeolicus (strain VF5) RepID=GMHA_AQUAE
gmhA; phosphoheptose isomerase
13_1_20cm_2_scaffold_9_8
Thermoplasmatales archaeon E-plasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

9742..12060
DNA (2319bp) protein (773aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon E-plasma RepID=T0MV72_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EQB67171.1}; TaxID=667137 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; environmental samples.;" source="Thermoplasmatales archaeon E-pl
transporter
13_1_20cm_2_scaffold_9_9
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

12327..13322
DNA (996bp) protein (332aa)
glucose-1-phosphate thymidyltransferase (EC:2.7.7.24); K00973 glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] Tax=RBG_13_Bathyarchaeota_38_9_curated
glucose-1-phosphate thymidyltransferase (EC:2.7.7.24)
Glucose-1-phosphate thymidyltransferase n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D556_METSW
13_1_20cm_2_scaffold_9_10
R_OD1_Nomurabacteria_33_12, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(13358..14098)
DNA (741bp) protein (247aa)
Glycosyl transferase n=1 Tax=Mycobacterium kansasii ATCC 12478 RepID=U5WT87_MYCKA
family 2 glycosyl transferase Tax=RIFCSPHIGHO2_02_FULL_OD1_Nomurabacteria_33_12_curated
glycosyl transferase
13_1_20cm_2_scaffold_9_11
unknown

Not on your lists

comp(14105..14410)
DNA (306bp) protein (102aa)

This feature has no annotations

13_1_20cm_2_scaffold_9_12
Pyrococcus yayanosii, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(14817..15824)
DNA (1008bp) protein (336aa)
dTDP-glucose 4,6-dehydratase n=1 Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AHX9_PYRYC
dTDP-glucose 4,6-dehydratase {ECO:0000313|EMBL:AEH25436.1}; TaxID=529709 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus yayanosii (stra
dTDP-glucose 4,6-dehydratase
13_1_20cm_2_scaffold_9_13
Methanobacterium paludis, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

16083..16847
DNA (765bp) protein (255aa)
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:AEG17590.1}; EC=1.1.1.133 {ECO:0000313|EMBL:AEG17590.1};; TaxID=868131 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanob
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D555_METSW
13_1_20cm_2_scaffold_9_14
RBG_16_Nitrospirae_43_11_curated, Nitrospirae, Bacteria

Not on your lists

comp(16964..17908)
DNA (945bp) protein (315aa)
Glycosyl transferase family 2 n=1 Tax=bacterium Ellin514 RepID=B9XD38_9BACT alias=ACD18_1193.5388.23G0001,ACD18_1193.5388.23_1,ACD18_C00110G00001 id=13908 tax=ACD18 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia organism_group=OD1, not OD1-i organism_desc= OD1
glycosyltransferase Tax=RBG_16_Nitrospirae_43_11_curated
glycosyl transferase family protein
13_1_20cm_2_scaffold_9_15
GWE2_OD1_40_11, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

18197..18694
DNA (498bp) protein (166aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR40735.1}; TaxID=1619033 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWE2_40_11.;"
Conserved domain protein alias=gwe2_scaffold_308_43 id=1956030 tax=GWE2_OD1_40_11 species=Methylococcus capsulatus str. Bath genus=Methylococcus taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria
type 11 methyltransferase
13_1_20cm_2_scaffold_9_16

Not on your lists

comp(18827..19318)
DNA (492bp) protein (164aa)
Putative dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=uncultured archaeon RepID=I3RKT2_9ARCH
Putative dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:AFK24942.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
dTDP-4-dehydrorhamnose 3 5-epimerase-like protein
13_1_20cm_2_scaffold_9_17
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

19481..20722
DNA (1242bp) protein (414aa)
C-methyltransferase Tax=AR10
C-methyltransferase
SAM-dependent methyltransferase alias=gwa2_scaffold_1516_16 id=5046429 tax=GW2011_AR10 species=Candidatus Nitrosoarchaeum limnia genus=Candidatus Nitrosoarchaeum taxon_order=Nitrosopumilales taxon_class=unknown phylum=Thaumarchaeota organism_desc=gwa2_.44_58 (temp) rbh
13_1_20cm_2_scaffold_9_18
unknown

Not on your lists

20758..21417
DNA (660bp) protein (220aa)

This feature has no annotations

13_1_20cm_2_scaffold_9_19
Staphylothermus marinus, Staphylothermus, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(21428..22537)
DNA (1110bp) protein (370aa)
Glycosyl transferase, group 1 n=1 Tax=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) RepID=A3DN36_STAMF
Glycosyl transferase, group 1 {ECO:0000313|EMBL:ABN70046.1}; TaxID=399550 species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Desulfurococcaceae; Staphylothermus.;" source="Staphylotherm
group 1 glycosyl transferase
13_1_20cm_2_scaffold_9_20
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

22659..23450
DNA (792bp) protein (264aa)
Putative glycosyltransferase n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I6Q2_METCZ
glycosyl transferase family protein Tax=RBG_16_Nitrospirae_64_22_curated
glycosyltransferase
13_1_20cm_2_scaffold_9_21

Not on your lists

23573..24103
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0B8T7_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:AIF20324.1}; TaxID=1456339 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_89_C12.;"
hypothetical protein
13_1_20cm_2_scaffold_9_22
unknown

Not on your lists

24423..24719
DNA (297bp) protein (99aa)

This feature has no annotations

13_1_20cm_2_scaffold_9_23
unknown

Not on your lists

25240..25860
DNA (621bp) protein (207aa)

This feature has no annotations

13_1_20cm_2_scaffold_9_24
Thermococcus onnurineus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

25879..26751
DNA (873bp) protein (291aa)
UDP-glucose 4-epimerase n=1 Tax=Thermococcus onnurineus (strain NA1) RepID=B6YWD7_THEON
UDP-glucose 4-epimerase {ECO:0000313|EMBL:ACJ16400.1}; TaxID=523850 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus onnurineus (stra
UDP-glucose 4-epimerase
13_1_20cm_2_scaffold_9_25
unknown

Not on your lists

27060..27254
DNA (195bp) protein (65aa)

This feature has no annotations

13_1_20cm_2_scaffold_9_26
unknown

Not on your lists

27437..27766
DNA (330bp) protein (110aa)

This feature has no annotations

13_1_20cm_2_scaffold_9_27
Ferroglobus placidus, Ferroglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

comp(27779..28489)
DNA (711bp) protein (237aa)
O-methyltransferase-like protein n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S225_FERPA
O-methyltransferase-like protein {ECO:0000313|EMBL:ADC66516.1}; TaxID=589924 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Ferroglobus.;" source="Ferroglobus placid
O-methyltransferase-like protein
13_1_20cm_2_scaffold_9_28
unknown

Not on your lists

comp(29165..29359)
DNA (195bp) protein (65aa)

This feature has no annotations

13_1_20cm_2_scaffold_9_29
Desulfurococcus kamchatkensis, Desulfurococcus, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(29962..30435)
DNA (474bp) protein (158aa)
Small heat shock protein HSP20 n=1 Tax=Desulfurococcus fermentans DSM 16532 RepID=I3XSD3_9CREN
Small heat shock protein Hsp20 {ECO:0000313|EMBL:ACL11166.1}; TaxID=490899 species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Desulfurococcaceae; Desulfurococcus.;" source="Desulfurococ
small heat shock protein HSP20
13_1_20cm_2_scaffold_9_30
Thermofilum sp. 1910b, Thermofilum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists


comp(30566..31033)
DNA (468bp) protein (156aa)
50S ribosomal protein L30P n=1 Tax=Thermofilum sp. 1910b RepID=S5Z672_9CREN
50S ribosomal protein L30P {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00081760}; TaxID=1365176 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermofilaceae; Thermofilum.;
LSU ribosomal protein L7e (L30p)
Displaying items 1-30 of 91 in total

View Taxonomy