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13_1_20cm_4_scaffold_1573

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_1573_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..577)
DNA (576bp) protein (192aa)
ABC transporter permease n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000305C02F
ABC transporter substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
extracellular ligand-binding receptor
13_1_20cm_4_scaffold_1573_2
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(637..1017)
DNA (381bp) protein (127aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JEY8_9ARCH
hypothetical protein Tax=RBG_16_Deltaproteobacteria_42_7_curated
hypothetical protein
13_1_20cm_4_scaffold_1573_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1083..1799)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PFL6_9BRAD
ABC transporter; K01996 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
branched-chain amino acid transport system ATP-binding protein
13_1_20cm_4_scaffold_1573_4
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1792..2544)
DNA (753bp) protein (251aa)
Putative branched-chain amino acid transport system ATP-binding protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8ALP0_AZOBR
Amino acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:AIB11640.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" sou
amino acid ABC transporter ATP-binding protein
13_1_20cm_4_scaffold_1573_5
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2680..3087
DNA (408bp) protein (136aa)
Phosphoribosyl-AMP cyclohydrolase {ECO:0000255|HAMAP-Rule:MF_01021}; Short=PRA-CH {ECO:0000255|HAMAP-Rule:MF_01021};; EC=3.5.4.19 {ECO:0000255|HAMAP-Rule:MF_01021};; TaxID=414684 species="Bacteria; Pr
hisL; phosphoribosyl-AMP cyclohydrolase (EC:3.5.4.19)
Phosphoribosyl-AMP cyclohydrolase n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=HIS3_RHOCS
13_1_20cm_4_scaffold_1573_6
unknown

Not on your lists

comp(3097..3576)
DNA (480bp) protein (160aa)

This feature has no annotations

13_1_20cm_4_scaffold_1573_7
Nitrosococcus watsonii, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3753..4589)
DNA (837bp) protein (279aa)
Putative uncharacterized protein n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8K6A9_NITWC
Uncharacterized protein {ECO:0000313|EMBL:ADJ28436.1}; TaxID=105559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus watsoni
hypothetical protein
13_1_20cm_4_scaffold_1573_8
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4586..5011)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AQB5_AZOBR
Membrane protein {ECO:0000313|EMBL:AIB13656.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;
membrane protein
13_1_20cm_4_scaffold_1573_9
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5011..5646)
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Halomonas lutea RepID=UPI00036879E0
Uncharacterized protein {ECO:0000313|EMBL:CBS90087.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum li
hypothetical protein
13_1_20cm_4_scaffold_1573_10
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

5870..6268
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EHQ4_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:CCF84216.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source
hypothetical protein
13_1_20cm_4_scaffold_1573_11
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6475..7842)
DNA (1368bp) protein (456aa)
Gamma-glutamylcysteine synthetase n=1 Tax=Oceanibaculum indicum P24 RepID=K2JZN2_9PROT rbh
Glutamate--cysteine ligase {ECO:0000313|EMBL:KJB96197.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella
glutamate--cysteine ligase
13_1_20cm_4_scaffold_1573_12
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7885..8361)
DNA (477bp) protein (159aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rh
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Oceanibaculum indicum P24 RepID=K2KEQ6_9PROT
hypothetical protein
Displaying 12 items

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