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13_1_20cm_4_scaffold_3936

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_3936_1
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..358
DNA (357bp) protein (119aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1052004 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetob
Dihydrolipoamide dehydrogenase (EC:1.8.1.4)
Dihydrolipoyl dehydrogenase n=1 Tax=Rhodovulum sp. PH10 RepID=J6JDF1_9RHOB
13_1_20cm_4_scaffold_3936_2
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(362..1408)
DNA (1047bp) protein (349aa)
Tyrosine recombinase xerC n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F6U7_9PROT rbh
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magn
xerC; Tyrosine recombinase xerC
13_1_20cm_4_scaffold_3936_3
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1483..2232)
DNA (750bp) protein (250aa)
Site-specific tyrosine recombinase XerC n=1 Tax=alpha proteobacterium BAL199 RepID=A8TIN7_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KJB94880.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aer
hypothetical protein
13_1_20cm_4_scaffold_3936_4
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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2390..4636
DNA (2247bp) protein (749aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=1064539 species="Bacteria;
Primosomal protein N' (Replication factor Y) n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AIR9_AZOBR rbh
priA; primosomal protein N' (replication factor Y)
13_1_20cm_4_scaffold_3936_5
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(4652..6007)
DNA (1356bp) protein (452aa)
major facilitator transporter n=1 Tax=Amycolatopsis methanolica RepID=UPI00036D84B5
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AIJ23843.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methan
benK; major facilitator superfamily MFS_1
13_1_20cm_4_scaffold_3936_6
Caenispirillum salinarum, Caenispirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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6180..6740
DNA (561bp) protein (187aa)
ATP synthase subunit delta n=1 Tax=Caenispirillum salinarum AK4 RepID=K9HWE9_9PROT
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; T
atpH; F-type H+-transporting ATPase subunit delta
13_1_20cm_4_scaffold_3936_7
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

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6751..8280
DNA (1530bp) protein (510aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit a
F0F1 ATP synthase subunit alpha n=1 Tax=Elioraea tepidiphila RepID=UPI00038240E5 rbh
atpA; ATP synthase, F1 sector, alpha subunit
13_1_20cm_4_scaffold_3936_8
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8301..9191
DNA (891bp) protein (297aa)
atpG; F0F1 ATP synthase subunit gamma (EC:3.6.3.14)
ATP synthase gamma chain n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=ATPG_RHOCS rbh
ATP synthase gamma chain {ECO:0000255|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000255|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000255|HAMAP-Rule:MF_00815}; TaxID=4146
13_1_20cm_4_scaffold_3936_9
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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9210..10016
DNA (807bp) protein (269aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347, ECO:0000313|EMBL:CCQ72368.1};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF
atpD; ATP synthase subunit beta, membrane-bound, F1 sector (EC:3.6.3.14 3.6.3.15)
F0F1 ATP synthase subunit beta n=1 Tax=Elioraea tepidiphila RepID=UPI0003602E4F
13_1_20cm_4_scaffold_3936_10
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9998..10501
DNA (504bp) protein (168aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347, ECO:0000313|EMBL:CCC97137.1};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF
ATP synthase subunit beta n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AIS5_AZOBR
atpD; ATP synthase, F1 sector, beta subunit
13_1_20cm_4_scaffold_3936_11
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10507..10953
DNA (447bp) protein (149aa)
ATP synthase epsilon chain n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z5R0_AZOL4
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; TaxI
atpC1; ATP synthase, F1 sector subunit epsilon epsilon
13_1_20cm_4_scaffold_3936_12
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10994..12262)
DNA (1269bp) protein (423aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PK49_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS41941.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
major facilitator superfamily protein
13_1_20cm_4_scaffold_3936_13
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12358..13257
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2J8L8_9PROT rbh
Uncharacterized protein {ECO:0000313|EMBL:KJB94890.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aer
hypothetical protein
13_1_20cm_4_scaffold_3936_14
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13317..14744)
DNA (1428bp) protein (476aa)
Acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase n=1 Tax=Rhodanobacter denitrificans RepID=I4WKZ3_9GAMM rbh
Acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase {ECO:0000313|EMBL:AGG88264.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xa
acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase
Displaying 14 items

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