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13_1_20cm_4_scaffold_1368_6

Organism: 13_1_20CM_4_Alphaproteobacteria_65_11

partial RP 25 / 55 BSCG 26 / 51 ASCG 3 / 38
Location: comp(3348..4367)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059, ECO:0000313|EMBL:KJB96789.1}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rul UNIPROT
DB: UniProtKB
  • Identity: 82.3
  • Coverage: 339.0
  • Bit_score: 569
  • Evalue 4.30e-159
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 81.1
  • Coverage: 339.0
  • Bit_score: 554
  • Evalue 2.20e-155
DNA-directed RNA polymerase subunit alpha n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AKN0_AZOBR similarity UNIREF
DB: UNIREF100
  • Identity: 81.4
  • Coverage: 338.0
  • Bit_score: 554
  • Evalue 7.70e-155
  • rbh

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Taxonomy

Skermanella aerolata → Skermanella → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1020
GTGCTTCAACGCAACTGGCAAACTCTGATTAAACCGAAAGCGCTGTCGGTCGAGCCGGGCGACGATCCCGCGCGGGCCGCCACCGTGACTGCCGAGCCGCTCGAGCGCGGCTTTGGCCTGACCCTCGGCAATGCGCTGCGGCGGGTGCTCCTGTCGTCGCTGCAAGGCGCCGCCGTCACCTCGATGCAGATCGAGGGCGTGCTGCATGAATTCTCCTCGCTTCCGGGCGTGCTCGAGGATGTCACCGACATCGTCCTCAACGTCAAGAGCATCGGGCTGCGCATGCACGGCGAAGGCCCAAAGCGCATTCGCCTGCGCGCCCAGGGGCCCGGCGAGGTCCGCGCCGGCGCGATCGAGGCGGGGCATGACATCGAGATCCTCAACCCGGATCTCGTCATCTGCACGCTCGACAGCGGCGCCCGCATTTCGATGGAAATGACCGTCGAGCACGGCAAGGGCTATCTGCCGGGCACACAGAACCGGCCGGAGGATGCCCCGATTGGGCTCATCCCGGTTGATGCGCTGTTCAGCCCGGTGCGCAAGGTCTCCTACCGGGTCGAGAACACCCGCGTCGGCCAGGTCACCGACTATGACAGCCTGTCGATGCGGGTCGAGACCAACGGCGCGATGTCACCCGAGGACGCCGTCGCGCTCGCAGCACGCATCCTGCAGGACCAGCTCCAGCTCTTCATCAATTTCGAGGAGCCACGCCACGCCGTCGAGAAGGACGTCGCTGGCGGCGAGCCGCTGATCAACAAGAACCTGTTGCGCAAGGTCGACGAGCTCGAGCTCTCGGTCCGTTCGGCCAACTGCCTGAAGAACGACAACATCGTCTATATCGGCGACCTCGTTCAGAAGACCGAGGCCGAGATGCTGCGGACGCCCAATTTCGGTCGCAAATCCTTGAACGAGATCAAGGAGGTACTGGCCAATATGGGGCTCCATCTCGGCATGGAGATCGCGAACTGGCCGCCCGAGAACATTGAAGAGCTGGCCAAGCGCATCGACGAGCCGTATTAA
PROTEIN sequence
Length: 340
VLQRNWQTLIKPKALSVEPGDDPARAATVTAEPLERGFGLTLGNALRRVLLSSLQGAAVTSMQIEGVLHEFSSLPGVLEDVTDIVLNVKSIGLRMHGEGPKRIRLRAQGPGEVRAGAIEAGHDIEILNPDLVICTLDSGARISMEMTVEHGKGYLPGTQNRPEDAPIGLIPVDALFSPVRKVSYRVENTRVGQVTDYDSLSMRVETNGAMSPEDAVALAARILQDQLQLFINFEEPRHAVEKDVAGGEPLINKNLLRKVDELELSVRSANCLKNDNIVYIGDLVQKTEAEMLRTPNFGRKSLNEIKEVLANMGLHLGMEIANWPPENIEELAKRIDEPY*