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13_1_20cm_4_scaffold_1368

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Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_1368_1

Not on your lists

3..1931
DNA (1929bp) protein (643aa)
Acetyl/propionyl-CoA carboxylase alpha subunit n=1 Tax=uncultured organism RepID=Q1EHY0_9ZZZZ rbh
Acetyl/propionyl-CoA carboxylase alpha subunit {ECO:0000313|EMBL:CAK32559.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
propionyl-CoA carboxylase alpha chain,biotin-carrying subunit
13_1_20cm_4_scaffold_1368_2
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1935..2228
DNA (294bp) protein (98aa)
Acylphosphatase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RBP9_PHEZH
Acylphosphatase {ECO:0000313|EMBL:ACG76509.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zuci
acylphosphatase
13_1_20cm_4_scaffold_1368_3
Hoeflea sp. IMCC20628, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2277..2555
DNA (279bp) protein (93aa)
Putative transcriptional regulator n=1 Tax=Rhizobium sp. CF080 RepID=J2HUN7_9RHIZ
Putative transcriptional regulator {ECO:0000313|EMBL:AKI03421.1}; TaxID=1620421 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp.
hypothetical protein
13_1_20cm_4_scaffold_1368_4
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2552..2833
DNA (282bp) protein (94aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q20Y77_RHOPB
Uncharacterized protein {ECO:0000313|EMBL:ABD89909.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas
hypothetical protein
13_1_20cm_4_scaffold_1368_5
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(2830..3255)
DNA (426bp) protein (142aa)
50S ribosomal protein L17 n=1 Tax=Oceanibaculum indicum P24 RepID=K2JT54_9PROT
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; O
rplQ; 50S ribosomal protein L17
13_1_20cm_4_scaffold_1368_6
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3348..4367)
DNA (1020bp) protein (340aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059, ECO:0000313|EMBL:KJB96789.1}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rul
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AKN0_AZOBR rbh
13_1_20cm_4_scaffold_1368_7
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(4518..4817)
DNA (300bp) protein (100aa)
30S ribosomal protein S11 n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TNV9_TISMK
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella m
rpsK; 30S ribosomal protein S11
13_1_20cm_4_scaffold_1368_8
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5284..5979)
DNA (696bp) protein (232aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU0033
Adenylate kinase n=1 Tax=Oceanibaculum indicum P24 RepID=K2K8I4_9PROT rbh
adk; adenylate kinase
13_1_20cm_4_scaffold_1368_9
RLO_Rhodospirillales_58_28, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(6208..7212)
DNA (1005bp) protein (335aa)
Protein translocase subunit SecY n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z374_AZOL4
secY; preprotein translocase secY subunit; K03076 preprotein translocase subunit SecY Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_58_28_curated
secY; preprotein translocase secY subunit
13_1_20cm_4_scaffold_1368_10
Rhizobium sp. Pop5, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(7275..7811)
DNA (537bp) protein (179aa)
50S ribosomal protein L15 n=1 Tax=Rhizobium sp. Pop5 RepID=K0WJD9_9RHIZ
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=1223565 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/A
50S ribosomal protein L15
13_1_20cm_4_scaffold_1368_11
R_Alphaproteobacteria_46_13, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(7884..8084)
DNA (201bp) protein (67aa)
50S ribosomal protein L30 n=1 Tax=Rhodospirillum photometricum DSM 122 RepID=H6SSI7_RHOPH
rpmD; Ribosomal protein L30; K02907 large subunit ribosomal protein L30 Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_46_13_curated
rpmD; Ribosomal protein L30
13_1_20cm_4_scaffold_1368_12
Elstera litoralis, Elstera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(8084..8329)
DNA (246bp) protein (82aa)
30S ribosomal protein S5 n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IRS3_RHOCS
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=552518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Els
rpsE; 30S ribosomal protein S5
13_1_20cm_4_scaffold_1368_13
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(8556..8921)
DNA (366bp) protein (122aa)
50S ribosomal protein L18 n=5 Tax=Methylobacterium extorquens RepID=RL18_METC4
50S ribosomal protein L18 {ECO:0000255|HAMAP-Rule:MF_01337}; TaxID=419610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylob
rplR; 50S ribosomal protein L18
13_1_20cm_4_scaffold_1368_14
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(8940..9473)
DNA (534bp) protein (178aa)
50S ribosomal protein L6 n=1 Tax=alpha proteobacterium BAL199 RepID=A8TZJ7_9PROT
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Ca
50S ribosomal protein L6
13_1_20cm_4_scaffold_1368_15
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(9496..9894)
DNA (399bp) protein (133aa)
30S ribosomal protein S8 n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NS54_AZOS1
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirill
rpsH; 30S ribosomal protein S8
13_1_20cm_4_scaffold_1368_16
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(9908..10213)
DNA (306bp) protein (102aa)
30S ribosomal protein S14 n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z8Q9_AZOL4
30S ribosomal protein S14 {ECO:0000256|HAMAP-Rule:MF_00537}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospiril
rpsN; 30S ribosomal protein S14
13_1_20cm_4_scaffold_1368_17
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(10237..10776)
DNA (540bp) protein (180aa)
50S ribosomal protein L5 n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IRR8_RHOCS
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333, ECO:0000256|RuleBase:RU003931}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rho
rplE; 50S ribosomal protein L5
13_1_20cm_4_scaffold_1368_18
Elstera litoralis, Elstera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(10802..11122)
DNA (321bp) protein (107aa)
50S ribosomal protein L24 n=1 Tax=Paenibacillus curdlanolyticus YK9 RepID=E0I8H4_9BACL
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=552518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Elstera.;" source="Elstera litora
50S ribosomal protein L24
13_1_20cm_4_scaffold_1368_19
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(11125..11493)
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=alpha proteobacterium BAL199 RepID=A8TZK3_9PROT
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; A
rplN; 50S ribosomal subunit protein L14
13_1_20cm_4_scaffold_1368_20
Micavibrio aeruginosavorus, Micavibrio, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(11490..11843)
DNA (354bp) protein (118aa)
30S ribosomal protein S17 n=2 Tax=Micavibrio aeruginosavorus RepID=G2KQV4_MICAA
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=856793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Micavibrio.;" source="Micavibrio aerugi
30S ribosomal protein S17
13_1_20cm_4_scaffold_1368_21
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(11845..12072)
DNA (228bp) protein (76aa)
50S ribosomal protein L29 n=1 Tax=Amorphus coralli RepID=UPI00035D6F40
50S ribosomal protein L29 {ECO:0000255|HAMAP-Rule:MF_00374}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodosp
rpmC; 50S ribosomal protein L29
13_1_20cm_4_scaffold_1368_22
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(12069..12494)
DNA (426bp) protein (142aa)
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; S
50S ribosomal protein L16
50S ribosomal protein L16 id=3298596 bin=GWC2_Alphaproteobacteria_42_16 species=Candidatus Puniceispirillum marinum genus=Candidatus Puniceispirillum taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
13_1_20cm_4_scaffold_1368_23
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(12506..13213)
DNA (708bp) protein (236aa)
30S ribosomal protein S3 n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z8Q7_AZOL4 rbh
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309, ECO:0000313|EMBL:KJB96772.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Sker
rpsC; 30S ribosomal protein S3
13_1_20cm_4_scaffold_1368_24
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(13213..13608)
DNA (396bp) protein (132aa)
50S ribosomal protein L22 n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=RL22_RHOCS
50S ribosomal protein L22 {ECO:0000255|HAMAP-Rule:MF_01331}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodosp
rplV; 50S ribosomal protein L22
13_1_20cm_4_scaffold_1368_25
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(13610..13888)
DNA (279bp) protein (93aa)
30S ribosomal protein S19 n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AEL1_AZOBR
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospiri
30S ribosomal protein S19
13_1_20cm_4_scaffold_1368_26
Phaeospirillum molischianum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(13907..14734)
DNA (828bp) protein (276aa)
50S ribosomal protein L2 n=2 Tax=Phaeospirillum RepID=H8FN05_PHAMO rbh
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=1150626 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeosp
rplB; 50S ribosomal protein L2
13_1_20cm_4_scaffold_1368_27
Caenispirillum salinarum, Caenispirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(14737..15069)
DNA (333bp) protein (111aa)
50S ribosomal protein L23 n=1 Tax=Caenispirillum salinarum AK4 RepID=K9GVR0_9PROT
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369, ECO:0000256|RuleBase:RU003935}; TaxID=1238182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; C
50S ribosomal protein L23
13_1_20cm_4_scaffold_1368_28
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(15066..15683)
DNA (618bp) protein (206aa)
50S ribosomal protein L4 n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NS41_AZOS1
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirill
rplD; 50S ribosomal protein L4
13_1_20cm_4_scaffold_1368_29
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(15680..16444)
DNA (765bp) protein (255aa)
50S ribosomal protein L3 n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NS40_AZOS1 rbh
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Sk
50S ribosomal protein L3
13_1_20cm_4_scaffold_1368_30
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(16454..16768)
DNA (315bp) protein (105aa)
30S ribosomal protein S10 n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AEL6_AZOBR
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508, ECO:0000313|EMBL:KJB96767.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Ske
rpsJ; 30S ribosomal subunit protein S10
Displaying items 1-30 of 31 in total

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