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13_1_20cm_4_scaffold_2660

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_2660_1
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(2..1267)
DNA (1266bp) protein (422aa)
replicative DNA helicase; K02314 replicative DNA helicase [EC:3.6.4.12] Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
replicative DNA helicase; K02314 replicative DNA helicase [EC:3.6.4.12] id=24411203 bin=RBG_19FT_COMBO_GAL15_69_19 species=Allochromatium vinosum genus=Allochromatium taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
XRE family transcriptional regulator
13_1_20cm_4_scaffold_2660_2
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(1463..3415)
DNA (1953bp) protein (651aa)
sigma 54 interacting domain-containing protein (EC:3.4.21.53); K01338 ATP-dependent Lon protease [EC:3.4.21.53] Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
sigma 54 interacting domain-containing protein (EC:3.4.21.53); K01338 ATP-dependent Lon protease [EC:3.4.21.53] id=24411202 bin=RBG_19FT_COMBO_GAL15_69_19 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate rbh
sigma 54 interacting domain-containing protein (EC:3.4.21.53)
13_1_20cm_4_scaffold_2660_3
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists


comp(3436..3882)
DNA (447bp) protein (149aa)
50S ribosomal protein L9 Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
50S ribosomal protein L9 id=24411201 bin=RBG_19FT_COMBO_GAL15_69_19 species=Thermobacillus composti genus=Thermobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
50S ribosomal protein L9
13_1_20cm_4_scaffold_2660_4
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(3887..4861)
DNA (975bp) protein (325aa)
hypothetical protein Tax=CSP1_3_Armatimonadetes
hypothetical protein id=14632206 bin=bin9_gal15 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin9_gal15 organism_group=GAL15
hypothetical protein
13_1_20cm_4_scaffold_2660_5
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists


comp(4921..5181)
DNA (261bp) protein (87aa)
ribosomal protein S18 Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
ribosomal protein S18 id=24411199 bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
rpsR; 30S ribosomal protein S18
13_1_20cm_4_scaffold_2660_6
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(5272..5679)
DNA (408bp) protein (136aa)
single-strand binding protein; K03111 single-strand DNA-binding protein Tax=CSP1_3_Armatimonadetes
single-strand binding protein; K03111 single-strand DNA-binding protein id=24411198 bin=RBG_19FT_COMBO_GAL15_69_19 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
single-strand binding protein
13_1_20cm_4_scaffold_2660_7
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists


comp(5688..6086)
DNA (399bp) protein (133aa)
rpsF; 30S ribosomal protein S6; K02990 small subunit ribosomal protein S6 Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
rpsF; 30S ribosomal protein S6; K02990 small subunit ribosomal protein S6 id=24411197 bin=RBG_19FT_COMBO_GAL15_69_19 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
rpsF; 30S ribosomal protein S6
13_1_20cm_4_scaffold_2660_8
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(6264..7160)
DNA (897bp) protein (299aa)
hypothetical protein Tax=GWC2_Nitrospirae_57_13_curated
Uncharacterized protein id=1821595 bin=GWD2_Nitrospirae-related_57_8 species=Glaciecola psychrophila genus=Glaciecola taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
Ig domain-containing protein
13_1_20cm_4_scaffold_2660_9
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(7348..7527)
DNA (180bp) protein (60aa)
Transcriptional regulator, LuxR family n=1 Tax=Frankia sp. CN3 RepID=G6H8I2_9ACTO
LuxR family transcriptional regulator Tax=RBG_16_Actinobacteria_67_10_curated
LuxR family transcriptional regulator
13_1_20cm_4_scaffold_2660_10
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(7697..8788)
DNA (1092bp) protein (364aa)
GTP-binding protein YchF; K06942 Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
GTP-binding protein YchF; K06942 id=24411194 bin=RBG_19FT_COMBO_GAL15_69_19 species=Halothermothrix orenii genus=Halothermothrix taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate rbh
GTP-binding protein YchF
13_1_20cm_4_scaffold_2660_11
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(8892..11081)
DNA (2190bp) protein (730aa)
diguanylate cyclase Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
diguanylate cyclase id=24411193 bin=RBG_19FT_COMBO_GAL15_69_19 species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
diguanylate cyclase
13_1_20cm_4_scaffold_2660_12
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(11159..11977)
DNA (819bp) protein (273aa)
diguanylate cyclase Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
diguanylate cyclase id=24411193 bin=RBG_19FT_COMBO_GAL15_69_19 species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
GAF sensor-containing diguanylate cyclase
13_1_20cm_4_scaffold_2660_13
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(12112..12324)
DNA (213bp) protein (71aa)
hypothetical protein Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
hypothetical protein id=24411192 bin=RBG_19FT_COMBO_GAL15_69_19 species=Veillonella atypica genus=Veillonella taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
hypothetical protein
13_1_20cm_4_scaffold_2660_14
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(12391..13665)
DNA (1275bp) protein (425aa)
spermine synthase Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
spermine synthase id=24411191 bin=RBG_19FT_COMBO_GAL15_69_19 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate rbh
spermine synthase
13_1_20cm_4_scaffold_2660_15
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(13879..15237)
DNA (1359bp) protein (453aa)
ATP-dependent chaperone ClpB Tax=CSP1_3_Armatimonadetes
ATP-dependent chaperone ClpB id=14632221 bin=bin9_gal15 species=Chthonomonas calidirosea genus=Chthonomonas taxon_order=Chthonomonadales taxon_class=Chthonomonadetes phylum=Armatimonadetes tax=bin9_gal15 organism_group=GAL15
ATP-dependent chaperone ClpB
13_1_20cm_4_scaffold_2660_16
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(15207..16301)
DNA (1095bp) protein (365aa)
ATP-dependent chaperone ClpB Tax=CSP1_3_Armatimonadetes
ATP-dependent chaperone ClpB id=14632221 bin=bin9_gal15 species=Chthonomonas calidirosea genus=Chthonomonas taxon_order=Chthonomonadales taxon_class=Chthonomonadetes phylum=Armatimonadetes tax=bin9_gal15 organism_group=GAL15
ATP-dependent chaperone ClpB
Displaying 16 items

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