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13_1_20cm_4_scaffold_4972

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_4972_1
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(3..338)
DNA (336bp) protein (112aa)
glycine dehydrogenase subunit beta (EC:1.4.4.2); K00283 glycine dehydrogenase subunit 2 [EC:1.4.4.2] Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
glycine dehydrogenase subunit beta (EC:1.4.4.2); K00283 glycine dehydrogenase subunit 2 [EC:1.4.4.2] id=24447206 bin=RBG_19FT_COMBO_GAL15_69_19 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
gcvPB; protein GcvPB
13_1_20cm_4_scaffold_4972_2
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(335..1735)
DNA (1401bp) protein (467aa)
gcvPA; glycine dehydrogenase [decarboxylating] subunit 1 (Glycine decarboxylase subunit 1) (Glycine cleavage system P-protein subunit 1) (EC:1.4.4.2) Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
gcvPA; glycine dehydrogenase [decarboxylating] subunit 1 (Glycine decarboxylase subunit 1) (Glycine cleavage system P-protein subunit 1) (EC:1.4.4.2) id=24447207 bin=RBG_19FT_COMBO_GAL15_69_19 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate rbh
gcvPA; glycine dehydrogenase [decarboxylating] subunit 1 (Glycine decarboxylase subunit 1) (Glycine cleavage system P-protein subunit 1) (EC:1.4.4.2)
13_1_20cm_4_scaffold_4972_3
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(1732..2118)
DNA (387bp) protein (129aa)
glycine cleavage system protein H Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
glycine cleavage system protein H id=24447208 bin=RBG_19FT_COMBO_GAL15_69_19 species=Bacillus methanolicus genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
gcvH; glycine cleavage system H protein
13_1_20cm_4_scaffold_4972_4
GWA2_Ignavibacteriae_55_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(2214..2438)
DNA (225bp) protein (75aa)
aminomethyltransferase; K00605 aminomethyltransferase [EC:2.1.2.10] Tax=GWA2_Ignavibacteriae_55_25_curated
gcvT; glycine cleavage system aminomethyltransferase T (EC:2.1.2.10); K00605 aminomethyltransferase [EC:2.1.2.10] id=24447209 bin=RBG_19FT_COMBO_GAL15_69_19 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
gcvT; glycine cleavage system aminomethyltransferase T (EC:2.1.2.10)
13_1_20cm_4_scaffold_4972_5
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2518..3177)
DNA (660bp) protein (220aa)
Aminomethyltransferase {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981}; EC=2.1.2.10 {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981};; Glycine cleavage system T protei
gcvT; glycine cleavage system aminomethyltransferase T (EC:2.1.2.10); K00605 aminomethyltransferase [EC:2.1.2.10] id=24447209 bin=RBG_19FT_COMBO_GAL15_69_19 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
aminomethyltransferase (EC:2.1.2.10)
13_1_20cm_4_scaffold_4972_6
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(3184..3954)
DNA (771bp) protein (257aa)
phosphoribosyltransferase Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
phosphoribosyltransferase id=24447210 bin=RBG_19FT_COMBO_GAL15_69_19 tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
phosphoribosyl transferase domain protein
13_1_20cm_4_scaffold_4972_7
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(3987..5471)
DNA (1485bp) protein (495aa)
hypothetical protein Tax=CSP1_3_Armatimonadetes
hypothetical protein id=14632030 bin=bin9_gal15 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin9_gal15 organism_group=GAL15 rbh
hypothetical protein
13_1_20cm_4_scaffold_4972_8
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(5607..6161)
DNA (555bp) protein (185aa)
metal dependent phosphohydrolase Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
metal dependent phosphohydrolase id=24447212 bin=RBG_19FT_COMBO_GAL15_69_19 species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate rbh
metal dependent phosphohydrolase
13_1_20cm_4_scaffold_4972_9
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(6217..6579)
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Laceyella sacchari RepID=UPI0003B31B30
Uncharacterized protein {ECO:0000313|EMBL:KIJ73446.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
hypothetical protein
13_1_20cm_4_scaffold_4972_10
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(6589..8058)
DNA (1470bp) protein (490aa)
Drug resistance transporter, EmrB/QacA subfamily n=2 Tax=Chloroflexus RepID=A9WJU2_CHLAA
EmrB/QacA subfamily drug resistance transporter Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
EmrB/QacA subfamily drug resistance transporter
13_1_20cm_4_scaffold_4972_11
Mycobacterium kansasii, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8102..8509)
DNA (408bp) protein (136aa)
pyridoxamine 5''''-phosphate oxidase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B77A49
Pyridoxamine 5'-phosphate oxidase {ECO:0000313|EMBL:AGZ53145.1}; TaxID=557599 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium kansasii AT
pyridoxamine 5'-phosphate oxidase
13_1_20cm_4_scaffold_4972_12
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

comp(8528..9418)
DNA (891bp) protein (297aa)
S1C family peptidase Tax=RBG_16_Armatimonadetes_67_12_curated
putative protease Do id=14632806 bin=bin9_gal15 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=bin9_gal15 organism_group=GAL15 rbh
putative protease Do
13_1_20cm_4_scaffold_4972_13
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

comp(9580..10167)
DNA (588bp) protein (196aa)
LuxR family transcriptional regulator Tax=RBG_16_Armatimonadetes_67_12_curated
two component LuxR family transcriptional regulator id=14632807 bin=bin9_gal15 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin9_gal15 organism_group=GAL15
LuxR family transcriptional regulator
13_1_20cm_4_scaffold_4972_14
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(10320..11408)
DNA (1089bp) protein (363aa)
K+ channel, pore region Tax=CSP1_3_Armatimonadetes
K+ channel, pore region id=14630847 bin=bin9_gal15 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin9_gal15 organism_group=GAL15 rbh
hypothetical protein
13_1_20cm_4_scaffold_4972_15
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11467..12276
DNA (810bp) protein (270aa)
Uncharacterized protein {ECO:0000313|EMBL:AGP41432.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
hydrolase, alpha/beta fold family protein id=12554598 bin=CNBR_ACIDO species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
13_1_20cm_4_scaffold_4972_16
unknown

Not on your lists

comp(12079..12492)
DNA (414bp) protein (138aa)

This feature has no annotations

13_1_20cm_4_scaffold_4972_17
Meiothermus silvanus, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(12514..13017)
DNA (504bp) protein (168aa)
DoxX family protein n=1 Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BI78_MEISD
DoxX family protein {ECO:0000313|EMBL:ADH62352.1}; Flags: Precursor;; TaxID=526227 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus silvanu
DoxX family protein
13_1_20cm_4_scaffold_4972_18
unknown

Not on your lists

comp(13080..13163)
DNA (84bp) protein (28aa)

This feature has no annotations

Displaying 18 items

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