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13_1_20cm_4_scaffold_2240

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_2240_1
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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comp(1..1170)
DNA (1170bp) protein (390aa)
Peptidase S9 prolyl oligopeptidase active site domain protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TIK0_9CHLR
Peptidase S9 prolyl oligopeptidase active site domain protein {ECO:0000313|EMBL:EFH89257.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedon
peptidase S9 prolyl oligopeptidase active site domain-containing protein
13_1_20cm_4_scaffold_2240_2
GWA2_OP11_47_9, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

1217..2542
DNA (1326bp) protein (442aa)
Uncharacterized protein Tax=GWA2_OP11_47_9
transmembrane_regions 168..185 id=41914 bin=ACD37 species=ACD37 genus=ACD37 taxon_order=ACD37 taxon_class=ACD37 phylum=OP11 tax=ACD37 organism_group=OP11 (Microgenomates) organism_desc=OP11
13_1_20cm_4_scaffold_2240_3
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

2539..3855
DNA (1317bp) protein (439aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I0M9_CALAS
Uncharacterized protein {ECO:0000313|EMBL:BAL98816.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 1
hypothetical protein
13_1_20cm_4_scaffold_2240_4
RIFOXYC12_FULL_Chloroflexi_59_14_curated, Chloroflexi, Bacteria

Not on your lists

3868..4338
DNA (471bp) protein (157aa)
seg 9..22 Tax=RIFOXYC12_FULL_Chloroflexi_59_14_curated
seg 9..22 id=1244620 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
13_1_20cm_4_scaffold_2240_5
Neosynechococcus sphagnicola, Neosynechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists


4458..4841
DNA (384bp) protein (128aa)
30S ribosomal protein S12 n=1 Tax=Synechococcus sp. (strain JA-3-3Ab) RepID=RS12_SYNJA
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=1497020 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Neosynechococcus.;" so
rpsL; 30S ribosomal protein S12
13_1_20cm_4_scaffold_2240_6
RBG_19FT_COMBO_Thermodesulfovibrio_41_18_curated, Nitrospirae, Bacteria

Not on your lists


4843..5313
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C2K1_SPHTD
rpsG; 30S ribosomal protein S7; K02992 small subunit ribosomal protein S7 Tax=RBG_19FT_COMBO_Thermodesulfovibrio_41_18_curated
30S ribosomal protein S7
13_1_20cm_4_scaffold_2240_7
Moorella thermoacetica, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

5336..7417
DNA (2082bp) protein (694aa)
Elongation factor G n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=EFG_MOOTA rbh
Elongation factor G {ECO:0000255|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000255|HAMAP-Rule:MF_00054};; TaxID=264732 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacter
fusA; elongation factor G
13_1_20cm_4_scaffold_2240_8
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

7392..8474
DNA (1083bp) protein (361aa)
tuf; elongation factor Tu (EC:3.6.5.3)
Elongation factor Tu n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=EFTU_SOLUE
Elongation factor Tu {ECO:0000255|HAMAP-Rule:MF_00118}; Short=EF-Tu {ECO:0000255|HAMAP-Rule:MF_00118};; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Ca
13_1_20cm_4_scaffold_2240_9
Peptococcaceae bacterium BRH_c4b, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


8478..8783
DNA (306bp) protein (102aa)
30S ribosomal protein S10 n=1 Tax=Desulfurispora thermophila RepID=UPI0003703FAA
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=1629717 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c4b.;"
ribosomal protein S10, bacterial/organelle
13_1_20cm_4_scaffold_2240_10
Clostridium sp. CAG:389, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8785..9432
DNA (648bp) protein (216aa)
50S ribosomal protein L3 n=1 Tax=Succinispira mobilis RepID=UPI000364563A
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=1262801 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environm
50S ribosomal protein L3
13_1_20cm_4_scaffold_2240_11
S_Thermoanaerobacterales_50_218, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists


9451..10071
DNA (621bp) protein (207aa)
50S ribosomal protein L4 Tax=S_Thermoanaerobacterales_50_218
50S ribosomal protein L4; K02926 large subunit ribosomal protein L4 id=14629549 bin=bin8_Chloro species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
50S ribosomal protein L4/L1e
13_1_20cm_4_scaffold_2240_12
Thermus thermophilus, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists


10068..10358
DNA (291bp) protein (97aa)
50S ribosomal protein L23 n=6 Tax=Thermus RepID=RL23_THET2
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369}; TaxID=762633 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.;" source="Thermus thermophilus (strain SG0
rplW; 50S ribosomal protein L23
13_1_20cm_4_scaffold_2240_13
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists


10358..11203
DNA (846bp) protein (282aa)
50S ribosomal protein L2 n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6THE1_9CHLR
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter
50S ribosomal protein L2
13_1_20cm_4_scaffold_2240_14
Thermosediminibacter oceani, Thermosediminibacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists


11207..11491
DNA (285bp) protein (95aa)
30S ribosomal protein S19 n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9RZL6_THEOJ
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=555079 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermose
30S ribosomal protein S19
13_1_20cm_4_scaffold_2240_15
Mycobacterium xenopi, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


11494..12150
DNA (657bp) protein (219aa)
50S ribosomal protein L22 n=1 Tax=Mycobacterium xenopi RIVM700367 RepID=I0RCB0_MYCXE
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=1150591 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" sourc
50S ribosomal protein L22
13_1_20cm_4_scaffold_2240_16
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists


12151..13119
DNA (969bp) protein (323aa)
30S ribosomal protein S3 n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6Q1K2_9FIRM
30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 Tax=RBG_16_Chloroflexi_68_14_curated
30S ribosomal protein S3
Novel, suspect Chloroflexi Jill Banfield (10/17/14)
13_1_20cm_4_scaffold_2240_17
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists


13122..13787
DNA (666bp) protein (222aa)
50S ribosomal protein L16 n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKH5_9BACT
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus M
rplP; 50S ribosomal protein L16
13_1_20cm_4_scaffold_2240_18
Eggerthella sp. CAG:209, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


13784..13948
DNA (165bp) protein (55aa)
50S ribosomal protein L29 n=1 Tax=Actinoalloteichus spitiensis RepID=UPI0002F29861
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1262875 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella; environmental samples.;" sou
50S ribosomal protein L29
Displaying 18 items

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