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13_1_20cm_4_scaffold_6373_2

Organism: 13_1_20CM_4_Chloroflexi_66_15

partial RP 13 / 55 BSCG 16 / 51 ASCG 3 / 38
Location: comp(689..1177)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_16_RIF_CHLX_70_13_curated UNIPROT
DB: UniProtKB
  • Identity: 39.1
  • Coverage: 161.0
  • Bit_score: 104
  • Evalue 1.40e-19
RNA polymerase, sigma-24 subunit, ECF subfamily id=4718001 bin=GWC2_Chloroflexi_73_18 species=Alicyclobacillus acidocaldarius genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 36.8
  • Coverage: 163.0
  • Bit_score: 100
  • Evalue 1.90e-18
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 32.1
  • Coverage: 156.0
  • Bit_score: 77
  • Evalue 3.70e-12

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Taxonomy

RBG_16_RIF_CHLX_70_13_curated → RIF-CHLX → Bacteria

Sequences

DNA sequence
Length: 489
ATGGCGCTGACCGAGCCGATCAGCGACGCGGACGGGTTCGAGTCCGCGATTCGCATGGAGAGCGGCCGCCTCTTCGCCGTGGCCTATTCGATCCTCCGGGATGTCCAGGAAGCCGAGGACGCGGTGCAGGAAACCATGGAACTGGCCTGGCGCTCCTGGTCGACCTTGCGCGATCCGCTGAAGCGTGCCGCGTGGCTCCGCCAGATTTGTGTACGGCGAGCGCTTCGGCTGCGGCGACGGGTTCTTCCACGGCTCTGGCTGGCGGACCGCCTGGATACCGATCGGGCCGCCCCGCTGCAGTCCGATCCCGACCTCGATCGAAGCTACCGGCGGCTGACGCGCCAGCAGCGAGCCGTCATCGCTCTGCATTACGAGTACGGCTACACCATTGACGAGTGCGCTCACCTGATCGGTTGTGCTCCGGGCACGGCGCGCAGCCACCTGGCGCGCGCCCTGACCACCATGCGAAAGGACCTGCAAAATGAATAA
PROTEIN sequence
Length: 163
MALTEPISDADGFESAIRMESGRLFAVAYSILRDVQEAEDAVQETMELAWRSWSTLRDPLKRAAWLRQICVRRALRLRRRVLPRLWLADRLDTDRAAPLQSDPDLDRSYRRLTRQQRAVIALHYEYGYTIDECAHLIGCAPGTARSHLARALTTMRKDLQNE*