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13_1_40cm_scaffold_19116

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_19116_1
Thermobaculum terrenum, Thermobaculum, Bacteria

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comp(10..567)
DNA (558bp) protein (186aa)
Elongation factor P n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CCQ1_THET1
translation elongation factor P
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-7
13_1_40cm_scaffold_19116_2
Tetrasphaera elongata, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(564..1034)
DNA (471bp) protein (157aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169,
aroQ; 3-dehydroquinate dehydratase (EC:4.2.1.10)
3-dehydroquinate dehydratase n=1 Tax=Tetrasphaera elongata Lp2 RepID=N0DZG5_9MICO
13_1_40cm_scaffold_19116_3
R_Nitrospirae_66_17, Nitrospirae, Bacteria

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comp(1031..2623)
DNA (1593bp) protein (531aa)
3-dehydroquinate synthase; K13829 shikimate kinase / 3-dehydroquinate synthase [EC:2.7.1.71 4.2.3.4] Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
aroB-aroK; bifunctional 3-dehydroquinate synthase/shikimate kinase (EC:2.7.1.71 4.2.3.4); K01735 3-dehydroquinate synthase [EC:4.2.3.4] id=24447243 bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
3-dehydroquinate synthase (EC:2.7.1.71 4.2.3.4)
13_1_40cm_scaffold_19116_4
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

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comp(2623..3738)
DNA (1116bp) protein (372aa)
chorismate synthase (EC:4.2.3.5); K01736 chorismate synthase [EC:4.2.3.5] Tax=RBG_16_Chloroflexi_68_14_curated
chorismate synthase (EC:4.2.3.5); K01736 chorismate synthase [EC:4.2.3.5] id=12557000 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
chorismate synthase
13_1_40cm_scaffold_19116_5
CSP1_5_NC10, NC10, Bacteria

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comp(3738..4376)
DNA (639bp) protein (213aa)
aroE; shikimate dehydrogenase (EC:1.1.1.25) Tax=CSP1_5_NC10
aroE; shikimate dehydrogenase (EC:1.1.1.25) id=14429482 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
shikimate 5-dehydrogenase
13_1_40cm_scaffold_19116_6
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

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comp(4482..5234)
DNA (753bp) protein (251aa)
Aminodeoxychorismate lyase n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L506_THERP
hypothetical protein; K07082 UPF0755 protein Tax=RBG_13_Chloroflexi_68_17_curated
aminodeoxychorismate lyase
13_1_40cm_scaffold_19116_7
Oscillochloris trichoides, Oscillochloris, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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comp(5566..5946)
DNA (381bp) protein (127aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=765420 specie
Putative Holliday junction resolvase n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IER5_9CHLR
Holliday junction resolvase-like protein
13_1_40cm_scaffold_19116_8
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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comp(5998..7485)
DNA (1488bp) protein (496aa)
Mucin-associated surface protein id=3825068 bin=GWC2_Chloroflexi_73_18 species=Trypanosoma cruzi genus=Trypanosoma taxon_order=Kinetoplastida taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_scaffold_19116_9
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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comp(7482..8408)
DNA (927bp) protein (309aa)
alanyl-tRNA synthetase (EC:6.1.1.7); K01872 alanyl-tRNA synthetase [EC:6.1.1.7] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_scaffold_19116_10
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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comp(8488..10245)
DNA (1758bp) protein (586aa)
alanyl-tRNA synthetase (EC:6.1.1.7); K01872 alanyl-tRNA synthetase [EC:6.1.1.7] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C426_SPHTD
Displaying 10 items

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