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13_1_40cm_scaffold_22642

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_22642_1
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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comp(3..290)
DNA (288bp) protein (96aa)
argB; acetylglutamate kinase (EC:2.7.2.8); K00930 acetylglutamate kinase [EC:2.7.2.8] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Acetylglutamate kinase n=1 Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K0U9_DEHLB
acetylglutamate kinase
13_1_40cm_scaffold_22642_2
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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comp(301..1476)
DNA (1176bp) protein (392aa)
argJ; arginine biosynthesis bifunctional protein ArgJ; K00620 glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
argJ; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase (EC:2.3.1.1 2.3.1.35)
Arginine biosynthesis bifunctional protein ArgJ n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=ARGJ_SYMTH
13_1_40cm_scaffold_22642_3
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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comp(1473..2228)
DNA (756bp) protein (252aa)
N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38); K00145 N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9R9E0_AMMDK
13_1_40cm_scaffold_22642_4
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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2514..3656
DNA (1143bp) protein (381aa)
diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC:3.5.4.26 1.1.1.193); K11752 diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.
diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC:1.1.1.193 3.5.4.26)
Diaminohydroxyphosphoribosylaminopyrimidine deaminase 5-amino-6-(5-phosphoribosylamino)uracil reductase n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SJ49_THEM7
13_1_40cm_scaffold_22642_5
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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3665..4264
DNA (600bp) protein (200aa)
riboflavin synthase subunit alpha (EC:2.5.1.9); K00793 riboflavin synthase [EC:2.5.1.9] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein n=1 Tax=Corynebacterium ciconiae RepID=UPI00036394AE
riboflavin synthase subunit alpha
13_1_40cm_scaffold_22642_6
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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4287..5558
DNA (1272bp) protein (424aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase; K14652 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
GTP cyclohydrolase II; K14652 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] id=12555336 bin=CNBR_ACIDO species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ribBA; riboflavin biosynthesis protein RibBA (EC:4.1.99.12 3.5.4.25)
13_1_40cm_scaffold_22642_7
Toxocara canis, Toxocara, Ascaridida, Chromadorea, Nematoda, Metazoa

Not on your lists

comp(5555..7204)
DNA (1650bp) protein (550aa)
Uncharacterized protein n=1 Tax=Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416 / KR-200) RepID=L0A3S5_DEIPD
Repetitive proline-rich cell wall protein 2 {ECO:0000313|EMBL:KHN76455.1}; TaxID=6265 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Ascaridida; Ascaridoidea; Toxocaridae; Toxocara.;"
hypothetical protein
13_1_40cm_scaffold_22642_8
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(7201..8538)
DNA (1338bp) protein (446aa)
Urea amidolyase related protein n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) RepID=A4WU75_RHOS5
urea amidolyase Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
urea amidolyase-like protein
13_1_40cm_scaffold_22642_9
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(8535..9032)
DNA (498bp) protein (166aa)
Allophanate hydrolase, subunit 1 n=1 Tax=Thermococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) RepID=Q5JG31_THEKO
allophanate hydrolase subunit 1 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
allophanate hydrolase subunit 1
13_1_40cm_scaffold_22642_10
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(9164..9607)
DNA (444bp) protein (148aa)
LamB/YcsF family protein; K07160 UPF0271 protein Tax=GWC2_RIF_CHLX_73_18_curated
UPF0271 protein Cagg_1958 id=4924591 bin=GWC2_Chloroflexi_73_18 species=Chloroflexus aggregans genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
13_1_40cm_scaffold_22642_11
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(10045..10203)
DNA (159bp) protein (53aa)
V-type H(+)-translocating pyrophosphatase (EC:3.6.1.1); K15987 K(+)-stimulated pyrophosphate-energized sodium pump [EC:3.6.1.1] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
vpp1; V-type H(+)-translocating pyrophosphatase; K01507 inorganic pyrophosphatase [EC:3.6.1.1] id=1243035 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
V-type H(+)-translocating pyrophosphatase (EC:3.6.1.1)
Displaying 11 items

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