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13_1_40cm_2_scaffold_1340

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_1340_1
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

1..1095
DNA (1095bp) protein (365aa)
peptidase M24; K01271 Xaa-Pro dipeptidase [EC:3.4.13.9] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI0003619426
peptidase M24
13_1_40cm_2_scaffold_1340_2
RBG_16_Aminicenantes_66_30_curated, Aminicenantes, Bacteria

Not on your lists

comp(1325..2311)
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P7T0_9BACT
hypothetical protein Tax=RBG_16_Aminicenantes_66_30_curated
hypothetical protein
13_1_40cm_2_scaffold_1340_3
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(2606..3607)
DNA (1002bp) protein (334aa)
putative alpha/beta fold family hydrolase (EC:3.1.1.-); K07019 Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
Alpha/beta hydrolase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ISY7_KORVE
alpha/beta hydrolase
13_1_40cm_2_scaffold_1340_4
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

3844..5304
DNA (1461bp) protein (487aa)
inosine-5'-monophosphate dehydrogenase; K00088 IMP dehydrogenase [EC:1.1.1.205] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205)
inosine 5''''-monophosphate dehydrogenase n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000366272A
13_1_40cm_2_scaffold_1340_5
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5338..5877
DNA (540bp) protein (180aa)
Hypothetical membrane protein n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LXZ1_SYNAS
hypothetical protein Tax=RBG_16_Deltaproteobacteria_48_10_curated
hypothetical protein
13_1_40cm_2_scaffold_1340_6
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists


comp(5964..6395)
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000372222F
50S ribosomal protein L17 Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
50S ribosomal protein L17
13_1_40cm_2_scaffold_1340_7
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(6415..7443)
DNA (1029bp) protein (343aa)
DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
DNA-directed RNA polymerase subunit alpha n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=RPOA_KORVE
DNA-directed RNA polymerase subunit alpha
13_1_40cm_2_scaffold_1340_8
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists


comp(7594..8226)
DNA (633bp) protein (211aa)
30S ribosomal protein S4 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=RS4_SOLUE
30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
30S ribosomal protein S4
13_1_40cm_2_scaffold_1340_9
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists


comp(8263..8709)
DNA (447bp) protein (149aa)
30S ribosomal protein S11 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=RS11_KORVE
30S ribosomal protein S11; K02948 small subunit ribosomal protein S11 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
30S ribosomal protein S11
13_1_40cm_2_scaffold_1340_10
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists


comp(8770..9159)
DNA (390bp) protein (130aa)
30S ribosomal protein S13 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=RS13_SOLUE
rpsM; 30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
rpsM; 30S ribosomal protein S13
13_1_40cm_2_scaffold_1340_11
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(9311..9580)
DNA (270bp) protein (90aa)
Translation initiation factor IF-1 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=IF1_KORVE
infA; translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000255|HAMAP-Rule:MF_00075}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter ve
13_1_40cm_2_scaffold_1340_12
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(9596..10330)
DNA (735bp) protein (245aa)
methionine aminopeptidase, type I; K01265 methionyl aminopeptidase [EC:3.4.11.18] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00035ECA88
methionine aminopeptidase
13_1_40cm_2_scaffold_1340_13
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(10375..11061)
DNA (687bp) protein (229aa)
adenylate kinase; K00939 adenylate kinase [EC:2.7.4.3] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
adenylate kinase n=1 Tax=Thermodesulfobacterium thermophilum RepID=UPI0003B5A716
adenylate kinase
13_1_40cm_2_scaffold_1340_14
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists


comp(11077..12246)
DNA (1170bp) protein (390aa)
Protein translocase subunit SecY n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01WB2_SOLUE
protein translocase subunit SecY/sec61 alpha; K03076 preprotein translocase subunit SecY Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
protein translocase subunit SecY/sec61 alpha
Displaying 14 items

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