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13_1_40cm_2_scaffold_1485

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_1485_1
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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104..685
DNA (582bp) protein (194aa)
formate dehydrogenase (EC:1.2.1.2)
Formate dehydrogenase {ECO:0000313|EMBL:ABJ81837.1}; EC=1.2.1.2 {ECO:0000313|EMBL:ABJ81837.1};; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibact
Formate dehydrogenase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02AS9_SOLUE
13_1_40cm_2_scaffold_1485_2
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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734..2908
DNA (2175bp) protein (725aa)
Formate dehydrogenase alpha subunit {ECO:0000313|EMBL:ABJ81836.1}; EC=1.2.1.2 {ECO:0000313|EMBL:ABJ81836.1};; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacterace
formate dehydrogenase subunit alpha (EC:1.2.1.2)
Formate dehydrogenase alpha subunit n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02AT0_SOLUE
13_1_40cm_2_scaffold_1485_3
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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2862..3197
DNA (336bp) protein (112aa)
formate dehydrogenase subunit alpha (EC:1.2.1.2)
Formate dehydrogenase alpha subunit {ECO:0000313|EMBL:ABJ81836.1}; EC=1.2.1.2 {ECO:0000313|EMBL:ABJ81836.1};; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacterace
Formate dehydrogenase alpha subunit n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02AT0_SOLUE
13_1_40cm_2_scaffold_1485_4
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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3204..4091
DNA (888bp) protein (296aa)
formate dehydrogenase subunit beta (EC:1.2.1.2)
Formate dehydrogenase beta subunit {ECO:0000313|EMBL:ABJ81835.1}; EC=1.2.1.2 {ECO:0000313|EMBL:ABJ81835.1};; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteracea
Formate dehydrogenase beta subunit n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02AT1_SOLUE rbh
13_1_40cm_2_scaffold_1485_5
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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4088..4780
DNA (693bp) protein (231aa)
formate dehydrogenase subunit gamma (EC:1.2.1.2)
Formate dehydrogenase gamma subunit {ECO:0000313|EMBL:ABJ81834.1}; EC=1.2.1.2 {ECO:0000313|EMBL:ABJ81834.1};; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacterace
Formate dehydrogenase gamma subunit n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02AT2_SOLUE
13_1_40cm_2_scaffold_1485_6
R_Acidobacteria_68_18, Acidobacteria, Bacteria

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4777..5637
DNA (861bp) protein (287aa)
Uncharacterized protein involved in formate dehydrogenase formation n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02AT3_SOLUE
formate dehydrogenase formation protein; K02380 FdhE protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
formate dehydrogenase formation protein
13_1_40cm_2_scaffold_1485_7
BJP_IG2069_Syntrophobacterales_47_18, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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5776..5988
DNA (213bp) protein (71aa)
Transcriptional regulator, AbrB family n=1 Tax=uncultured bacterium RepID=K2CQ53_9BACT
AbrB family transcriptional regulator
Tax=BJP_IG2069_Syntrophobacterales_47_18
13_1_40cm_2_scaffold_1485_8

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5957..6361
DNA (405bp) protein (135aa)
Marine sediment metagenome DNA, contig: S06H3_S00284 {ECO:0000313|EMBL:GAI23432.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
twitching motility protein PilT
PIN domain protein id=4873505 bin=GWC2_OP3_44_8 species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
13_1_40cm_2_scaffold_1485_9
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

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6557..7078
DNA (522bp) protein (174aa)
hypothetical protein Tax=RBG_16_Chloroflexi_68_14_curated
hypothetical protein id=12554246 bin=CNBR_ACIDO species=Thioalkalivibrio sp. ALJ3 genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
13_1_40cm_2_scaffold_1485_10
unknown

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7844..8365
DNA (522bp) protein (174aa)

This feature has no annotations

13_1_40cm_2_scaffold_1485_11
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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8443..9765
DNA (1323bp) protein (441aa)
amidohydrolase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Amidohydrolase id=4817215 bin=GWC2_Ignavibacteria_56_12 species=Janthinobacterium sp. HH01 genus=Janthinobacterium taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
amidohydrolase
13_1_40cm_2_scaffold_1485_12
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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9835..10269
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00036DBD29
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hypothetical protein
13_1_40cm_2_scaffold_1485_13
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(10348..13608)
DNA (3261bp) protein (1087aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHD9_KORVE
Uncharacterized protein {ECO:0000313|EMBL:ABF43711.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacte
glucose dehydrogenase
13_1_40cm_2_scaffold_1485_14
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

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comp(13790..14356)
DNA (567bp) protein (189aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJI4_KORVE
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
hypothetical protein
13_1_40cm_2_scaffold_1485_15
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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comp(14681..15304)
DNA (624bp) protein (208aa)
LexA repressor; K01356 repressor LexA [EC:3.4.21.88] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
LexA repressor (EC:3.4.21.88)
LexA repressor n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q028R4_SOLUE
13_1_40cm_2_scaffold_1485_16
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

15541..17172
DNA (1632bp) protein (544aa)
Cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQV1_KORVE rbh
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
Cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:ABF40749.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae
Displaying 16 items

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