ggKbase home page

13_1_40cm_2_scaffold_15521

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_15521_1
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(1..936)
DNA (936bp) protein (312aa)
glycine dehydrogenase subunit 2; K00283 glycine dehydrogenase subunit 2 [EC:1.4.4.2] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
glycine dehydrogenase subunit 2 (EC:1.4.4.2)
Glycine dehydrogenase (Decarboxylating) beta subunit n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02BS5_SOLUE
13_1_40cm_2_scaffold_15521_2
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(933..2330)
DNA (1398bp) protein (466aa)
glycine cleavage system protein P (EC:1.4.4.2)
Probable glycine dehydrogenase (decarboxylating) subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712, ECO:0000256|SAAS:SAAS00015358}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00712, ECO:0000256|SAAS:SAAS00022796}
Probable glycine dehydrogenase [decarboxylating] subunit 1 n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZKV1_TERRK
13_1_40cm_2_scaffold_15521_3
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(2330..2722)
DNA (393bp) protein (131aa)
glycine cleavage system H protein; K02437 glycine cleavage system H protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
gcvH; glycine cleavage system H protein; K02437 glycine cleavage system H protein id=15193252 bin=GWC2_NOV_55_46 species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_NOV_55_46 organism_group=Proteobacteria
glycine cleavage system H protein
13_1_40cm_2_scaffold_15521_4
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

comp(2803..3507)
DNA (705bp) protein (235aa)
glycine cleavage system T protein (EC:2.1.2.10); K00605 aminomethyltransferase [EC:2.1.2.10] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
gcvT; glycine cleavage system aminomethyltransferase T (EC:2.1.2.10)
glycine cleavage system protein T n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B77B8B
13_1_40cm_2_scaffold_15521_5
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4326..4766
DNA (441bp) protein (147aa)
putative anti-sigma regulatory factor; K04757 anti-sigma B factor [EC:2.7.11.1] Tax=RBG_16_Deltaproteobacteria_48_10_curated
Putative uncharacterized protein n=1 Tax=endosymbiont of Riftia pachyptila (vent Ph05) RepID=G2DCT2_9GAMM
putative anti-sigma regulatory factor
13_1_40cm_2_scaffold_15521_6
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

4738..5097
DNA (360bp) protein (120aa)
anti-sigma-B factor antagonist RbsV Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
anti-anti-sigma regulatory factor
Anti-sigma-factor antagonist id=3232214 bin=GWC1_Spirochaetes_27_15 species=Leptonema illini genus=Leptonema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC1_Spirochaetes_27_15 organism_group=Spirochaetes
13_1_40cm_2_scaffold_15521_7
bacterium UASB270, Bacteria

Not on your lists

5131..5925
DNA (795bp) protein (265aa)
Uncharacterized protein {ECO:0000313|EMBL:GAK59649.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
Putative uncharacterized protein id=4225143 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
hypothetical protein
13_1_40cm_2_scaffold_15521_8
bacterium UASB270, Bacteria

Not on your lists

5928..6734
DNA (807bp) protein (269aa)
ABC-type transport system {ECO:0000313|EMBL:GAK59650.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
ABC-type transport system involved in resistance to organic solvents, ATPase component id=4225144 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Caenispirillum salinarum genus=Caenispirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
putative ABC-type transporter, ATPase component
13_1_40cm_2_scaffold_15521_9
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

6806..7834
DNA (1029bp) protein (343aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00036E0DE7
hypothetical protein; K02067 putative ABC transport system substrate-binding protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein
13_1_40cm_2_scaffold_15521_10
unknown

Not on your lists

8829..9311
DNA (483bp) protein (161aa)

This feature has no annotations

Displaying 10 items

View Taxonomy