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13_1_40cm_2_scaffold_1691

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_1691_1
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

1..99
DNA (99bp) protein (33aa)
translation elongation factor 1A (EF-1A/EF-Tu); K02358 elongation factor Tu Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
translation elongation factor Tu
13_1_40cm_2_scaffold_1691_2
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists


137..466
DNA (330bp) protein (110aa)
rpsJ; 30S ribosomal protein S10; K02946 small subunit ribosomal protein S10 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
rpsJ; 30S ribosomal protein S10; K02946 small subunit ribosomal protein S10 id=12555580 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
rpsJ; 30S ribosomal protein S10
13_1_40cm_2_scaffold_1691_3
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists


507..1103
DNA (597bp) protein (199aa)
50S ribosomal protein L3 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=RL3_SOLUE
50S ribosomal protein L3P; K02906 large subunit ribosomal protein L3 Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
50S ribosomal protein L3P
13_1_40cm_2_scaffold_1691_4
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists


1189..1974
DNA (786bp) protein (262aa)
50S ribosomal protein L4 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=RL4_SOLUE
rplD; 50S ribosomal protein L4; K02926 large subunit ribosomal protein L4 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
rplD; 50S ribosomal protein L4
13_1_40cm_2_scaffold_1691_5
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists


1978..2274
DNA (297bp) protein (99aa)
50S ribosomal protein L23 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=RL23_KORVE
rplW; 50S ribosomal protein L23
50S ribosomal protein L23 {ECO:0000255|HAMAP-Rule:MF_01369}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis
13_1_40cm_2_scaffold_1691_6
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists


2314..3135
DNA (822bp) protein (274aa)
rplB; 50S ribosomal protein L2; K02886 large subunit ribosomal protein L2 Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
50S ribosomal protein L2; K02886 large subunit ribosomal protein L2 id=14625516 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
50S ribosomal protein L2
13_1_40cm_2_scaffold_1691_7
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists


3526..3870
DNA (345bp) protein (115aa)
30S ribosomal protein S19 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=RS19_SOLUE
rpsS; ribosomal protein S19; K02965 small subunit ribosomal protein S19 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
rpsS; 30S ribosomal protein S19
13_1_40cm_2_scaffold_1691_8
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists


3874..4386
DNA (513bp) protein (171aa)
50S ribosomal protein L22 n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B40D10
50S ribosomal protein L22; K02890 large subunit ribosomal protein L22 Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
50S ribosomal protein L22
13_1_40cm_2_scaffold_1691_9
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists


4452..5126
DNA (675bp) protein (225aa)
30S ribosomal protein S3 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=RS3_KORVE
30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
30S ribosomal protein S3
13_1_40cm_2_scaffold_1691_10
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists


5169..5585
DNA (417bp) protein (139aa)
50S ribosomal protein L16 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=RL16_KORVE
rplP; 50S ribosomal protein L16; K02878 large subunit ribosomal protein L16 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
rplP; 50S ribosomal protein L16
13_1_40cm_2_scaffold_1691_11
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists


5588..5902
DNA (315bp) protein (105aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00037DD39D
50S ribosomal protein L29
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis
13_1_40cm_2_scaffold_1691_12
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists


5899..6180
DNA (282bp) protein (94aa)
30S ribosomal protein S17 n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NQ76_GRAMM
30S ribosomal protein S17
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="
13_1_40cm_2_scaffold_1691_13
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists


6203..6571
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=RL14_SOLUE
rplN; 50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
rplN; 50S ribosomal protein L14
13_1_40cm_2_scaffold_1691_14
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists


6575..6928
DNA (354bp) protein (118aa)
50S ribosomal protein L24 n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=RL24_CARHZ
50S ribosomal protein L24; K02895 large subunit ribosomal protein L24 Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
rplX; 50S ribosomal protein L24
13_1_40cm_2_scaffold_1691_15
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists


6947..7489
DNA (543bp) protein (181aa)
50S ribosomal protein L5 n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=RL5_GEOUR
rplE; 50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
rplE; 50S ribosomal protein L5
13_1_40cm_2_scaffold_1691_16
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists


7512..7697
DNA (186bp) protein (62aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003822EB2
SSU ribosomal protein S14P; K02954 small subunit ribosomal protein S14 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
30S ribosomal protein S14
13_1_40cm_2_scaffold_1691_17
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists


7708..8106
DNA (399bp) protein (133aa)
30S ribosomal protein S8 n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00037E56F9
30S ribosomal protein S8
rpsH; 30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
13_1_40cm_2_scaffold_1691_18
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists


8149..8694
DNA (546bp) protein (182aa)
50S ribosomal protein L6 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=RL6_SOLUE
50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
rplF; 50S ribosomal protein L6
13_1_40cm_2_scaffold_1691_19
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists


8707..9087
DNA (381bp) protein (127aa)
50S ribosomal protein L18 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=RL18_SOLUE
50S ribosomal protein L18; K02881 large subunit ribosomal protein L18 Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
50S ribosomal protein L18
13_1_40cm_2_scaffold_1691_20
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists


9091..9669
DNA (579bp) protein (193aa)
30S ribosomal protein S5 n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8V7K1_TERSS
30S ribosomal protein S5
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Te
13_1_40cm_2_scaffold_1691_21
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists


9669..9878
DNA (210bp) protein (70aa)
50S ribosomal protein L30 n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6THC6_9CHLR
50S ribosomal protein L30; K02907 large subunit ribosomal protein L30 Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
rpmD; ribosomal protein L30/L7E
13_1_40cm_2_scaffold_1691_22
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists


9889..10392
DNA (504bp) protein (168aa)
50S ribosomal protein L15 n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SKY2_THEM7
50S ribosomal protein L15; K02876 large subunit ribosomal protein L15 Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
50S ribosomal protein L15
13_1_40cm_2_scaffold_1691_23
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

10402..10734
DNA (333bp) protein (111aa)
Protein translocase subunit SecY n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01WB2_SOLUE
protein translocase subunit SecY/sec61 alpha; K03076 preprotein translocase subunit SecY Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
protein translocase subunit SecY/sec61 alpha
Displaying 23 items

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