ggKbase home page

13_1_40cm_2_scaffold_2346

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_2346_1
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(227..946)
DNA (720bp) protein (240aa)
Cyclase family protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TTV9_9CHLR
putative cyclase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
cyclase family protein
13_1_40cm_2_scaffold_2346_2
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(1085..1720)
DNA (636bp) protein (212aa)
putative phosphonopyruvate decarboxylase; K13039 sulfopyruvate decarboxylase subunit beta [EC:4.1.1.79] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Thiamine pyrophosphate protein domain protein TPP-binding n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TTW0_9CHLR
thiamine pyrophosphate TPP-binding domain-containing protein
13_1_40cm_2_scaffold_2346_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(1720..2232)
DNA (513bp) protein (171aa)
Sulfopyruvate decarboxylase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TTW1_9CHLR
thiamine pyrophosphate TPP-binding domain-containing protein
Thiamine pyrophosphate TPP-binding domain-containing protein {ECO:0000313|EMBL:AHG88071.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_2_scaffold_2346_4
unknown

Not on your lists

comp(2187..2447)
DNA (261bp) protein (87aa)

This feature has no annotations

13_1_40cm_2_scaffold_2346_5
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

2505..3962
DNA (1458bp) protein (486aa)
3-octaprenyl-4-hydroxybenzoate carboxy-lyase (EC:4.1.1.-)
3-octaprenyl-4hydroxybenzoate decarboxylase {ECO:0000313|EMBL:ABJ84912.1}; EC=4.1.1.- {ECO:0000313|EMBL:ABJ84912.1};; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solib
3-octaprenyl-4hydroxybenzoate decarboxylase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01ZK3_SOLUE rbh
13_1_40cm_2_scaffold_2346_6
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

4240..4449
DNA (210bp) protein (70aa)
Excisionase/Xis, DNA-binding protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRN0_KORVE
excisionase/Xis, DNA-binding Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
excisionase
13_1_40cm_2_scaffold_2346_7
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

4503..5546
DNA (1044bp) protein (348aa)
Type IV pilus assembly protein PilM n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRM9_KORVE
type IV pilus assembly protein PilM; K02662 type IV pilus assembly protein PilM Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
type IV pilus assembly protein PilM
13_1_40cm_2_scaffold_2346_8
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

5549..6208
DNA (660bp) protein (220aa)
Fimbrial assembly protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRM8_KORVE
fimbrial assembly family protein; K02663 type IV pilus assembly protein PilN Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
fimbrial assembly protein
13_1_40cm_2_scaffold_2346_9
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

6218..6868
DNA (651bp) protein (217aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRM7_KORVE
hypothetical protein; K02664 type IV pilus assembly protein PilO Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein
13_1_40cm_2_scaffold_2346_10
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

6882..7649
DNA (768bp) protein (256aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRM6_KORVE
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
13_1_40cm_2_scaffold_2346_11
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

7646..9487
DNA (1842bp) protein (614aa)
Type II and III secretion system protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRM5_KORVE
type II and III secretion system protein; K02666 type IV pilus assembly protein PilQ Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
type II and III secretion system protein
Displaying 11 items

View Taxonomy