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13_1_40cm_2_scaffold_3656

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_3656_1
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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181..747
DNA (567bp) protein (189aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TG28_9CHLR
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EFH88730.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" sou
RNA polymerase sigma factor
13_1_40cm_2_scaffold_3656_2
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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737..1486
DNA (750bp) protein (250aa)
Putative anti-sigma factor n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHG3_KORVE
anti-sigma factor
Putative anti-sigma factor {ECO:0000313|EMBL:ABF43687.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (st
13_1_40cm_2_scaffold_3656_3
unknown

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comp(1501..1935)
DNA (435bp) protein (145aa)

This feature has no annotations

13_1_40cm_2_scaffold_3656_4
R_Acidobacteria_59_13, Acidobacteria, Bacteria

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2188..2451
DNA (264bp) protein (88aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
13_1_40cm_2_scaffold_3656_5
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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2509..3372
DNA (864bp) protein (288aa)
rhodanese domain-containing protein; K01011 thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
Rhodanese domain-containing protein; K01011 thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] id=14431442 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
rhodanese domain-containing protein
13_1_40cm_2_scaffold_3656_6
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

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comp(3470..6124)
DNA (2655bp) protein (885aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037EDD11 rbh
hypothetical protein
Gll1201 protein {ECO:0000313|EMBL:BAC89142.1}; TaxID=251221 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceus (strain PCC 7421).;"
13_1_40cm_2_scaffold_3656_7
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(6121..6486)
DNA (366bp) protein (122aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037FE469
PadR family transcriptional regulator
Transcriptional regulator, PadR family {ECO:0000313|EMBL:ABJ88458.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Sol
13_1_40cm_2_scaffold_3656_8
unknown

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comp(6571..7134)
DNA (564bp) protein (188aa)

This feature has no annotations

13_1_40cm_2_scaffold_3656_9
unknown

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comp(7170..8075)
DNA (906bp) protein (302aa)

This feature has no annotations

13_1_40cm_2_scaffold_3656_10
RBG_16_Caldithrix_48_16_curated, Caldithrix, Bacteria

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comp(8179..8835)
DNA (657bp) protein (219aa)
hypothetical protein Tax=RBG_16_Caldithrix_48_16_curated
DinB family protein id=717678 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
hypothetical protein
13_1_40cm_2_scaffold_3656_11
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

9157..10362
DNA (1206bp) protein (402aa)
ABC efflux pump, inner membrane subunit n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIC3_KORVE
efflux ABC transporter inner membrane protein
ABC efflux pump, inner membrane subunit {ECO:0000313|EMBL:ABF43377.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" s
13_1_40cm_2_scaffold_3656_12
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

10372..11610
DNA (1239bp) protein (413aa)
ABC efflux pump, inner membrane subunit n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIC4_KORVE
hypothetical protein Tax=RBG_16_Acidobacteria_70_10_curated
efflux ABC transporter inner membrane protein
Displaying 12 items

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