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13_1_40cm_2_scaffold_3747

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_3747_1
R_Acidobacteria_59_13, Acidobacteria, Bacteria

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comp(1..1245)
DNA (1245bp) protein (415aa)
glgA; glycogen synthase; K00703 starch synthase [EC:2.4.1.21] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
Glycogen synthase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=GLGA_KORVE
glgA; glycogen synthase
13_1_40cm_2_scaffold_3747_2
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

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1476..2207
DNA (732bp) protein (244aa)
dimethyladenosine transferase (EC:2.1.1.48); K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
rsmA; Ribosomal RNA small subunit methyltransferase A (EC:2.1.1.182)
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Selenomonas sp. F0473 RepID=K9CMI3_9FIRM
13_1_40cm_2_scaffold_3747_3
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(2204..2950)
DNA (747bp) protein (249aa)
Glycerophosphodiester phosphodiesterase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MK53_9BACT
glycerophosphodiester phosphodiesterase
Glycerophosphodiester phosphodiesterase {ECO:0000313|EMBL:CBE69675.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfe
13_1_40cm_2_scaffold_3747_4
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

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3106..3675
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036F4E8A
transport-associated protein
transport-associated protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
13_1_40cm_2_scaffold_3747_5
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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comp(3696..4484)
DNA (789bp) protein (263aa)
IclR family transcriptional regulator n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SCF9_9BACT
IclR family transcriptional regulator; K13641 IclR family transcriptional regulator, acetate operon repressor Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
IclR family transcriptional regulator
13_1_40cm_2_scaffold_3747_6
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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4948..5352
DNA (405bp) protein (135aa)
Malate synthase {ECO:0000313|EMBL:ABF43707.1}; EC=2.3.3.9 {ECO:0000313|EMBL:ABF43707.1};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" s
Malate synthase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHE3_KORVE
malate synthase
13_1_40cm_2_scaffold_3747_7
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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5551..6906
DNA (1356bp) protein (452aa)
isocitrate lyase (EC:4.1.3.1)
Isocitrate lyase {ECO:0000313|EMBL:ABJ86648.1}; EC=4.1.3.1 {ECO:0000313|EMBL:ABJ86648.1};; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Soli
Isocitrate lyase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01UM2_SOLUE
13_1_40cm_2_scaffold_3747_8
Chroococcidiopsis thermalis, Chroococcidiopsis, Pleurocapsales, Cyanobacteria, Bacteria

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7048..7503
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9U7P2_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY90845.1}; TaxID=251229 species="Bacteria; Cyanobacteria; Pleurocapsales; Chroococcidiopsis.;" source="Chroococcidiopsis thermalis PCC 7203.;"
13_1_40cm_2_scaffold_3747_9
R_Nitrospirae_62_14, Nitrospirae, Bacteria

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comp(7554..8189)
DNA (636bp) protein (212aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IN87_KORVE
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_40cm_2_scaffold_3747_10
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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8237..9139
DNA (903bp) protein (301aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037BCE14
ECF subfamily RNA polymerase sigma-24 factor
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter u
13_1_40cm_2_scaffold_3747_11
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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9471..10280
DNA (810bp) protein (270aa)
Uroporphyrinogen-III C-methyltransferase {ECO:0000313|EMBL:ABF41376.1}; EC=2.1.1.107 {ECO:0000313|EMBL:ABF41376.1};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae;
Uroporphyrinogen-III C-methyltransferase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IP24_KORVE
uroporphyrinogen-III C-methyltransferase
13_1_40cm_2_scaffold_3747_12
unknown

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10303..10434
DNA (132bp) protein (44aa)

This feature has no annotations

13_1_40cm_2_scaffold_3747_13
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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10477..11562
DNA (1086bp) protein (362aa)
Uncharacterized protein family UPF0324 n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NRI8_GRAMM rbh
hypothetical protein
Uncharacterized protein family UPF0324 {ECO:0000313|EMBL:AEU37346.1}; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis
13_1_40cm_2_scaffold_3747_14
Methanocella paludicola, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

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11970..14084
DNA (2115bp) protein (705aa)
Uncharacterized protein n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YYV0_METPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI61622.1}; TaxID=304371 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella paludicola
Displaying 14 items

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