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13_1_40cm_3_scaffold_2441

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_2441_1
unknown

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comp(3..311)
DNA (309bp) protein (103aa)

This feature has no annotations

13_1_40cm_3_scaffold_2441_2
Ferrimicrobium acidiphilum, Ferrimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

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comp(308..1114)
DNA (807bp) protein (269aa)
ABC transporter related protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C6F4_SPHTD
High-affinity branched-chain amino acid transport ATP-binding protein LivF {ECO:0000313|EMBL:KJE76494.1}; TaxID=1121877 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrob
ABC transporter
13_1_40cm_3_scaffold_2441_3
Mycobacterium vaccae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1089..1880)
DNA (792bp) protein (264aa)
ABC transporter-like protein n=1 Tax=Mycobacterium vaccae ATCC 25954 RepID=K0UD89_MYCVA
ABC transporter-like protein {ECO:0000313|EMBL:EJZ05247.1}; TaxID=1194972 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium vaccae ATCC 259
ABC transporter-like protein
13_1_40cm_3_scaffold_2441_4
Mycobacterium vaccae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1880..2854)
DNA (975bp) protein (325aa)
Inner-membrane translocator n=1 Tax=Mycobacterium vaccae ATCC 25954 RepID=K0UEB8_MYCVA
Inner-membrane translocator {ECO:0000313|EMBL:EJZ05246.1}; TaxID=1194972 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium vaccae ATCC 2595
inner-membrane translocator
13_1_40cm_3_scaffold_2441_5
Ferrimicrobium acidiphilum, Ferrimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

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comp(2851..3735)
DNA (885bp) protein (295aa)
Inner-membrane translocator n=1 Tax=Mycobacterium vaccae ATCC 25954 RepID=K0UJT1_MYCVA
High-affinity branched-chain amino acid transport system permease protein LivH {ECO:0000313|EMBL:KJE76490.1}; TaxID=1121877 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimi
inner-membrane translocator
13_1_40cm_3_scaffold_2441_6
Ferrimicrobium acidiphilum, Ferrimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

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comp(3767..5098)
DNA (1332bp) protein (444aa)
Extracellular ligand-binding receptor n=1 Tax=Mycobacterium vaccae ATCC 25954 RepID=K0V2K5_MYCVA
Receptor family ligand binding region {ECO:0000313|EMBL:KJE76489.1}; TaxID=1121877 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ferrimicrobium.;" source="Fer
Extracellular ligand-binding receptor
13_1_40cm_3_scaffold_2441_7
Alicyclobacillus acidocaldarius, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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5190..5906
DNA (717bp) protein (239aa)
GntR family transcriptional regulator n=1 Tax=Glaciibacter superstes RepID=UPI0003B34BD8
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ACV58626.1}; TaxID=521098 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicyclobacillus
13_1_40cm_3_scaffold_2441_8
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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comp(5903..6871)
DNA (969bp) protein (323aa)
2-dehydropantoate 2-reductase (EC:1.1.1.169)
2-dehydropantoate 2-reductase {ECO:0000313|EMBL:ABQ92681.1}; EC=1.1.1.169 {ECO:0000313|EMBL:ABQ92681.1};; Flags: Precursor;; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales;
2-dehydropantoate 2-reductase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5V1C8_ROSS1
13_1_40cm_3_scaffold_2441_9
Oscillochloris trichoides, Oscillochloris, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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comp(6868..8367)
DNA (1500bp) protein (500aa)
AMP-dependent synthetase and ligase n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IBU9_9CHLR
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:EFO81329.1}; TaxID=765420 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Oscillochloridaceae; Oscillochloris.;" so
AMP-dependent synthetase and ligase
13_1_40cm_3_scaffold_2441_10
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

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8406..9110
DNA (705bp) protein (235aa)
Uncharacterized protein id=4213232 bin=GWC2_Chloroflexi_73_18 species=unknown genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
amino acid oxidase Tax=GWC2_RIF_CHLX_73_18_curated
hypothetical protein
13_1_40cm_3_scaffold_2441_11
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

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9065..9790
DNA (726bp) protein (242aa)
putative oxidoreductase Tax=RBG_16_RIF_CHLX_72_14_curated
Uncharacterized protein id=4213232 bin=GWC2_Chloroflexi_73_18 species=unknown genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
FAD dependent oxidoreductase family protein
13_1_40cm_3_scaffold_2441_12
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(9793..10026)
DNA (234bp) protein (78aa)
Two component transcriptional regulator, LuxR family protein n=1 Tax=Streptomyces bingchenggensis (strain BCW-1) RepID=D7CG95_STRBB
two component LuxR family transcriptional regulator
LuxR family two component transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Displaying 12 items

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