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13_1_40cm_3_scaffold_455

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_455_1
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(109..828)
-----------------
DNA (720bp)
protein (240aa)
hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC:5.3.1.16); K01814 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] Tax=RBG_19FT_C
phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC:5.3.1.16)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Rhodobacteraceae bacterium HTCC2083 RepID=B6B0H4_9RHOB
13_1_40cm_3_scaffold_455_2
Synechococcus sp. RCC307, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(866..1357)
-----------------
DNA (492bp)
protein (164aa)
UPF0234 protein SynRCC307_1657 n=1 Tax=Synechococcus sp. (strain RCC307) RepID=A5GUK1_SYNR3
putative nucleotide-binding protein
UPF0234 protein SynRCC307_1657 {ECO:0000256|HAMAP-Rule:MF_00632}; TaxID=316278 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. (strai
13_1_40cm_3_scaffold_455_3
unknown

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comp(1350..1727)
-----------------
DNA (378bp)
protein (126aa)

This feature has no annotations

13_1_40cm_3_scaffold_455_4
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

1759..2754
-----------------
DNA (996bp)
protein (332aa)
Branched-chain amino acid aminotransferase n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B865_HERA2
branched-chain amino acid aminotransferase
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:ABX05998.1}; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Her
13_1_40cm_3_scaffold_455_5
Thermosinus carboxydivorans, Thermosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

2895..4031
-----------------
DNA (1137bp)
protein (379aa)
Glycerate kinase {ECO:0000313|EMBL:EAX46519.1}; EC=2.7.1.31 {ECO:0000313|EMBL:EAX46519.1};; TaxID=401526 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Thermosinus.;"
Glycerate kinase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HTZ8_9FIRM
glycerate kinase
13_1_40cm_3_scaffold_455_6
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

Not on your lists

4028..4795
-----------------
DNA (768bp)
protein (256aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KDW1_9FIRM
ECF subfamily RNA polymerase sigma-24 subunit Tax=RBG_13_Chloroflexi_68_17_curated
RNA polymerase sigma factor, sigma-70 family
13_1_40cm_3_scaffold_455_7
unknown

Not on your lists

4792..5379
-----------------
DNA (588bp)
protein (196aa)

This feature has no annotations

13_1_40cm_3_scaffold_455_8
RBG_13_ACD39_59_9_curated, ACD39, Bacteria

Not on your lists

5429..6268
-----------------
DNA (840bp)
protein (280aa)
pdxS; pyridoxal biosynthesis lyase PdxS (EC:4.-.-.-) Tax=RBG_13_ACD39_59_9_curated
atm:ANT_01650 pdxS; pyridoxal biosynthesis lyase PdxS; K06215 pyridoxine biosynthesis protein [EC:4.-.-.-] id=1244770 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
pyridoxal biosynthesis lyase PdxS
13_1_40cm_3_scaffold_455_9
Streptomyces sp. Tu6071, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6318..6872
-----------------
DNA (555bp)
protein (185aa)
Pyridoxal 5'-phosphate synthase subunit PdxT {ECO:0000256|HAMAP-Rule:MF_01615}; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01615};; Pdx2 {ECO:0000256|HAMAP-Rule:MF_01615}; Pyridoxal 5'-phosphate synthase g
Glutamine amidotransferase subunit PdxT n=1 Tax=Streptomyces sp. Tu6071 RepID=F3Z8P4_9ACTO
Glutamine amidotransferase subunit pdxT
13_1_40cm_3_scaffold_455_10
unknown

Not on your lists

7195..7803
-----------------
DNA (609bp)
protein (203aa)

This feature has no annotations

13_1_40cm_3_scaffold_455_11
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

7800..9353
-----------------
DNA (1554bp)
protein (518aa)
single-stranded nucleic acid binding R3H domain-containing protein id=14633013 bin=bin9_gal15 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin9_gal15 organism_group=GAL15
single-stranded nucleic acid binding R3H domain-containing protein Tax=CSP1_3_Armatimonadetes
single-stranded nucleic acid binding R3H
13_1_40cm_3_scaffold_455_12
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

9354..9959
-----------------
DNA (606bp)
protein (202aa)
thymidylate kinase (EC:2.7.4.9)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacte
Thymidylate kinase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SEB1_RHOMR
13_1_40cm_3_scaffold_455_13
Oscillochloris trichoides, Oscillochloris, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

10003..12393
-----------------
DNA (2391bp)
protein (797aa)
ABC transporter related protein n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IBA4_9CHLR
ABC transporter related protein {ECO:0000313|EMBL:EFO81589.1}; TaxID=765420 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Oscillochloridaceae; Oscillochloris.;" source
ABC transporter-like protein
13_1_40cm_3_scaffold_455_14
unknown

Not on your lists

12449..13612
-----------------
DNA (1164bp)
protein (388aa)

This feature has no annotations

13_1_40cm_3_scaffold_455_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(13625..14755)
-----------------
DNA (1131bp)
protein (377aa)
putative acyl-CoA dehydrogenase (EC:1.3.99.-) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Butyryl-CoA dehydrogenase id=4464474 bin=GWA2_Methylomirabilis_73_35 species=Frankia sp. CN3 genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
acyl-CoA dehydrogenase domain-containing protein
13_1_40cm_3_scaffold_455_16
unknown

Not on your lists

comp(14781..15398)
-----------------
DNA (618bp)
protein (206aa)

This feature has no annotations

13_1_40cm_3_scaffold_455_17
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15409..17019)
-----------------
DNA (1611bp)
protein (537aa)
Drug resistance transporter EmrB/QacA subfamily n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AYE3_RUBXD
EmrB/QacA family drug resistance transporter
Drug resistance transporter EmrB/QacA subfamily {ECO:0000313|EMBL:ABG03585.1}; Flags: Precursor;; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubr
13_1_40cm_3_scaffold_455_18
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(17016..17474)
-----------------
DNA (459bp)
protein (153aa)
Transcriptional regulator, MarR family n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C609_SPHTD
transcriptional regulator, MarR family
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ACZ39561.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaero
13_1_40cm_3_scaffold_455_19
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17537..18685)
-----------------
DNA (1149bp)
protein (383aa)
acyl-CoA dehydrogenase Tax=RBG_13_Deltaproteobacteria_65_10_curated
Acyl-CoA dehydrogenase domain protein id=4696833 bin=GWC2_Methylomirabilis_70_16 species=Patulibacter medicamentivorans genus=Patulibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
acyl-CoA dehydrogenase
13_1_40cm_3_scaffold_455_20
BJP_IG2069_Chloroflexi_70_12, Chloroflexi, Bacteria

Not on your lists

comp(18695..19606)
-----------------
DNA (912bp)
protein (304aa)
Putative oxidoreductase n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KYB7_THERP
putative oxidoreductase
Tax=BJP_IG2069_Chloroflexi_70_12
13_1_40cm_3_scaffold_455_21
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

Not on your lists

comp(19638..20345)
-----------------
DNA (708bp)
protein (236aa)
Negative regulator of genetic competence ClpC/MecB n=1 Tax=Desulfotomaculum hydrothermale Lam5 = DSM 18033 RepID=K8DY84_9FIRM
ATPase AAA-2 domain-containing protein; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC Tax=RBG_16_Chloroflexi_64_32_curated
ClpC ATPase
13_1_40cm_3_scaffold_455_22
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20361..21368)
-----------------
DNA (1008bp)
protein (336aa)
hypothetical protein n=1 Tax=Agromyces subbeticus RepID=UPI0003B3E173
DNA polymerase/3'-5' exonuclease PolX {ECO:0000313|EMBL:KJL17454.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirac
PHP domain-containing protein
13_1_40cm_3_scaffold_455_23
R_Elusimicrobia_59_12, Elusimicrobia, Bacteria

Not on your lists

21394..21972
-----------------
DNA (579bp)
protein (193aa)
folE; GTP cyclohydrolase I (EC:3.5.4.16); K01495 GTP cyclohydrolase I [EC:3.5.4.16] Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_59_12_curated
GTP cyclohydrolase 1 n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XX36_9BACT
GTP cyclohydrolase I
13_1_40cm_3_scaffold_455_24

Not on your lists

22052..22375
-----------------
DNA (324bp)
protein (108aa)
Bacterial regulatory protein, ArsR domain protein (Fragment) n=1 Tax=mine drainage metagenome RepID=T0YY72_9ZZZZ
Bacterial regulatory protein, ArsR domain protein {ECO:0000313|EMBL:EQD36892.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine dra
arsR; arsenical resistance operon repressor
13_1_40cm_3_scaffold_455_25
BJP_IG2158_Zixibacteria_48_33, Zixibacteria, Bacteria

Not on your lists

22372..23553
-----------------
DNA (1182bp)
protein (394aa)
dev:DhcVS_852 myo-inositol-1-phosphate synthase; K01858 myo-inositol-1-phosphate synthase [EC:5.5.1.4] id=1241312 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
ino1-like myo-inositol-1-phosphate synthase related
Tax=BJP_IG2158_Zixibacteria_48_33
13_1_40cm_3_scaffold_455_26
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24138..24512
-----------------
DNA (375bp)
protein (125aa)
hypothetical protein n=1 Tax=Candidatus Microthrix parvicella RepID=UPI0003676B28
Putative Lipid A biosynthesis lauroyl acyltransferase {ECO:0000313|EMBL:CCM65033.1}; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella
lipid A biosynthesis acyltransferase
13_1_40cm_3_scaffold_455_27
RBG_13_Chloroflexi_54_9_curated, Chloroflexi, Bacteria

Not on your lists

24509..25381
-----------------
DNA (873bp)
protein (291aa)
putative lipid A biosynthesis lauroyl acyltransferase; K02517 lipid A biosynthesis lauroyl acyltransferase [EC:2.3.1.-] Tax=RBG_13_Chloroflexi_54_9_curated
lipid A biosynthesis acyltransferase n=1 Tax=Nocardiopsis valliformis RepID=UPI00034D75AC
lauroyl acyltransferase
13_1_40cm_3_scaffold_455_28
RBG_13_Chloroflexi_53_26_curated, Chloroflexi, Bacteria

Not on your lists

25383..26555
-----------------
DNA (1173bp)
protein (391aa)
glycosyl transferase group 1 protein; K08256 phosphatidylinositol alpha-mannosyltransferase [EC:2.4.1.57] Tax=RBG_13_Chloroflexi_53_26_curated
hypothetical protein n=1 Tax=Bacteria RepID=UPI00036DFAD7
group 1 glycosyl transferase
13_1_40cm_3_scaffold_455_29
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

26536..27192
-----------------
DNA (657bp)
protein (219aa)
CDP-alcohol phosphatidyltransferase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UPK5_ROSS1
CDP-alcohol phosphatidyltransferase
CDP-alcohol phosphatidyltransferase {ECO:0000313|EMBL:ABQ88558.1}; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Ros
13_1_40cm_3_scaffold_455_30
R_OD1_Uhrbacteria_63_20, Uhrbacteria, Parcubacteria, Bacteria

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27204..28154
-----------------
DNA (951bp)
protein (317aa)
DNA polymerase III, delta prime subunit (EC:2.7.7.7); K02341 DNA polymerase III subunit delta' [EC:2.7.7.7] Tax=RIFCSPHIGHO2_01_FULL_OD1_Uhrbacteria_63_20_curated
DNA polymerase III, delta prime subunit (EC:2.7.7.7)
DNA polymerase III subunit delta' n=1 Tax=uncultured Chloroflexi bacterium RepID=H5SAM4_9CHLR
Displaying items 1-30 of 37 in total

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