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13_1_40cm_3_scaffold_6788

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_6788_1
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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1..792
DNA (792bp) protein (264aa)
ATP-dependent protease La (EC:3.4.21.53)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HA
Lon protease n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NL80_ROSCS
13_1_40cm_3_scaffold_6788_2
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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comp(713..1462)
DNA (750bp) protein (250aa)
CobB/CobQ domain protein glutamine amidotransferase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C647_SPHTD
CobB/CobQ domain-containing protein glutamine amidotransferase
CobB/CobQ domain protein glutamine amidotransferase {ECO:0000313|EMBL:ACZ37585.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobactera
13_1_40cm_3_scaffold_6788_3
BJP_IG2158_Actinobacteria_57_21, Bacteria

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comp(1469..2833)
DNA (1365bp) protein (455aa)
hypothetical protein id=24518465 bin=RBG_19FT_COMBO_GAL15_69_19 species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
UDP-N-acetylmuramyl tripeptide synthase
Tax=BJP_IG2158_Actinobacteria_57_21
13_1_40cm_3_scaffold_6788_4
Desulfotomaculum carboxydivorans, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2833..3588)
DNA (756bp) protein (252aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:M
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Desulfotomaculum carboxydivorans (strain DSM 14880 / VKM B-2319 / CO-1-SRB) RepID=F6B4G3_DESCC
13_1_40cm_3_scaffold_6788_5
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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comp(3585..4109)
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Thermus oshimai RepID=UPI0003686A7A
carbonic anhydrase
Carbonic anhydrases/acetyltransferases isoleucine patch superfamily-like protein {ECO:0000313|EMBL:ABG04710.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobac
13_1_40cm_3_scaffold_6788_6
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

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4160..4552
DNA (393bp) protein (131aa)
30S ribosomal protein S20 n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=RS20_ROSS1
30S ribosomal protein S20; K02968 small subunit ribosomal protein S20 Tax=RBG_16_Chloroflexi_68_14_curated
rpsT; 30S ribosomal protein S20
13_1_40cm_3_scaffold_6788_7
Thermobacillus composti, Thermobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(4556..5491)
DNA (936bp) protein (312aa)
DNA polymerase III, delta subunit n=1 Tax=Thermobacillus composti (strain DSM 18247 / JCM 13945 / KWC4) RepID=L0EFD2_THECK
DNA polymerase III subunit delta
DNA polymerase III, delta subunit {ECO:0000313|EMBL:AGA58522.1}; TaxID=717605 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Thermobacillus.;" source="Thermobacillus composti (s
13_1_40cm_3_scaffold_6788_8
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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comp(5488..7731)
DNA (2244bp) protein (748aa)
DNA internalization-like competence protein ComEC/Rec2
Putative competence protein ComEC id=1876984 bin=GWB2_Chloroflexi_54_36 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
Tax=BJP_IG2157_Anaerolineales_55_23
13_1_40cm_3_scaffold_6788_9
Amycolatopsis orientalis, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(7728..8306)
DNA (579bp) protein (193aa)
Competence protein ComEA n=1 Tax=Amycolatopsis orientalis HCCB10007 RepID=R4SPL6_AMYOR
comE; competence protein ComEA
Competence protein ComEA {ECO:0000313|EMBL:AGM04605.1}; TaxID=1156913 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis orientalis HCCB10
13_1_40cm_3_scaffold_6788_trna_1
unknown

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comp(8361..8431)
DNA (71bp)
transferRNA
13_1_40cm_3_scaffold_6788_10
unknown

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8446..8949
DNA (504bp) protein (168aa)

This feature has no annotations

13_1_40cm_3_scaffold_6788_11
Dictyoglomus turgidum, Dictyoglomus, Dictyoglomales, Dictyoglomia, Dictyoglomi, Bacteria

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comp(8999..11101)
DNA (2103bp) protein (701aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=515635 species="Bacteria; Dictyog
Leucine--tRNA ligase n=1 Tax=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) RepID=B8E2J3_DICTD
leucyl-tRNA synthetase
13_1_40cm_3_scaffold_6788_12
Thermotoga neapolitana, Thermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

comp(11104..11403)
DNA (300bp) protein (100aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=2337 species="Bacteria; Thermotog
Leucine--tRNA ligase n=1 Tax=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) RepID=B9K6W2_THENN
leuS; leucyl-tRNA synthetase
13_1_40cm_3_scaffold_6788_13
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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comp(11375..12199)
DNA (825bp) protein (275aa)
Putative uncharacterized protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AZR1_RUBXD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG03117.1}; Flags: Precursor;; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacte
13_1_40cm_3_scaffold_6788_14
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

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12223..12708
DNA (486bp) protein (162aa)
histidine triad (HIT) protein id=24429327 bin=RBG_19FT_COMBO_GAL15_69_19 species=Fervidicoccus fontis genus=Fervidicoccus taxon_order=Fervidicoccales taxon_class=Thermoprotei phylum=Crenarchaeota tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
histidine triad (HIT) protein Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
bis-adenosyl-polyphosphate hydrolase, FHIT domain-containing
13_1_40cm_3_scaffold_6788_15
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

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comp(12650..13408)
DNA (759bp) protein (253aa)
amidohydrolase 3; K07047 id=14632547 bin=bin9_gal15 species=Chloroflexus aggregans genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin9_gal15 organism_group=GAL15
amidohydrolase 3; K07047 Tax=CSP1_3_Armatimonadetes
amidohydrolase 3
Displaying 16 items

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