ggKbase home page

13_1_40cm_3_scaffold_957

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_957_1
unknown

Not on your lists

comp(1..168)
DNA (168bp) protein (56aa)

This feature has no annotations

13_1_40cm_3_scaffold_957_2
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

198..1346
DNA (1149bp) protein (383aa)
Putative membrane protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JIM8_OLICO
putative transmembrane protein
Putative transmembrane protein {ECO:0000313|EMBL:AEI05657.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha ca
13_1_40cm_3_scaffold_957_3
BJP_IG2103_ACD39_50_23, ACD39, Bacteria

Not on your lists

1380..4583
DNA (3204bp) protein (1068aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLR2_9BACT
hypothetical protein
Tax=BJP_IG2103_ACD39_50_23
13_1_40cm_3_scaffold_957_4
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

4580..7597
DNA (3018bp) protein (1006aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLR2_9BACT
hypothetical protein Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
hypothetical protein
13_1_40cm_3_scaffold_957_5
unknown

Not on your lists

7594..7905
DNA (312bp) protein (104aa)

This feature has no annotations

13_1_40cm_3_scaffold_957_6
unknown

Not on your lists

7955..8449
DNA (495bp) protein (165aa)

This feature has no annotations

13_1_40cm_3_scaffold_957_7
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

8509..9471
DNA (963bp) protein (321aa)
PfkB domain protein n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AYL3_HERA2 rbh
ribokinase-like domain-containing protein
PfkB domain protein {ECO:0000313|EMBL:ABX04991.1}; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacus
13_1_40cm_3_scaffold_957_8

Not on your lists

comp(9464..10219)
DNA (756bp) protein (252aa)
Putative ABC transporter (Permease) n=1 Tax=mine drainage metagenome RepID=E6Q212_9ZZZZ
Putative ABC transporter (Permease) {ECO:0000313|EMBL:CBI01222.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
ABC transporter
13_1_40cm_3_scaffold_957_9

Not on your lists

comp(10261..11139)
DNA (879bp) protein (293aa)
Putative ABC efflux transporter (ATP-binding protein) n=1 Tax=mine drainage metagenome RepID=E6PH73_9ZZZZ
Putative ABC efflux transporter (ATP-binding protein) {ECO:0000313|EMBL:CBH75811.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metageno
ABC transporter
13_1_40cm_3_scaffold_957_10
Micrococcus luteus, Micrococcus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11170..11592
DNA (423bp) protein (141aa)
HIT family hydrolase, diadenosine tetraphosphate hydrolase n=1 Tax=Micrococcus luteus (strain ATCC 4698 / DSM 20030 / JCM 1464 / NBRC 3333 / NCIMB 9278 / NCTC 2665 / VKM Ac-2230) RepID=C5CA11_MICLC
Diadenosine tetraphosphate hydrolase {ECO:0000313|EMBL:KFC52118.1}; TaxID=1270 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Micrococcus.;" source="Micrococcus luteus (Micrococcus
HIT family hydrolase, diadenosine tetraphosphate hydrolase
13_1_40cm_3_scaffold_957_11
unknown

Not on your lists

comp(11589..12104)
DNA (516bp) protein (172aa)

This feature has no annotations

13_1_40cm_3_scaffold_957_12
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

12134..12847
DNA (714bp) protein (238aa)
carboxymethylenebutenolidase; K01061 carboxymethylenebutenolidase [EC:3.1.1.45] Tax=RBG_16_RIF_CHLX_69_14_curated
dienelactone hydrolase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B5AE00
dienelactone hydrolase
13_1_40cm_3_scaffold_957_13
Paenibacillus sp. HGF7, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12896..14158
DNA (1263bp) protein (421aa)
Purine catabolism regulatory protein-like family n=2 Tax=Paenibacillus RepID=F5LPP1_9BACL
Purine catabolism regulatory protein-like family {ECO:0000313|EMBL:EGL15773.1}; TaxID=944559 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillu
transcriptional regulator
13_1_40cm_3_scaffold_957_14
Desmospora sp. 8437, Desmospora, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14298..15515
DNA (1218bp) protein (406aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=997346 species="Bacteria; Firmicutes; Bacilli; Bacillales; Thermoactin
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Desmospora sp. 8437 RepID=F5SCR3_9BACL
beta-ketoacyl-acyl-carrier-protein synthase II
13_1_40cm_3_scaffold_957_15
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15528..15785
DNA (258bp) protein (86aa)
Acyl carrier protein n=2 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MHF7_9FIRM
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridia
acyl carrier protein
13_1_40cm_3_scaffold_957_16
Paenibacillus sp. FSL H8-237, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15791..16828
DNA (1038bp) protein (346aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Paenibacillus sp. Aloe-11 RepID=H6CHL2_9BACL
3-oxoacyl-ACP synthase
13_1_40cm_3_scaffold_957_17
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

16839..17789
DNA (951bp) protein (317aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales;
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UYX4_ROSS1
malonyl CoA-acyl carrier protein transacylase
13_1_40cm_3_scaffold_957_18

Not on your lists

18108..18467
DNA (360bp) protein (120aa)
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=mine drainage metagenome RepID=T0Z5L4_9ZZZZ
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:EQD43331.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
3-oxoacyl-[acyl-carrier-protein] reductase
13_1_40cm_3_scaffold_957_19
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

18467..19294
DNA (828bp) protein (276aa)
accD; acetyl-CoA carboxylase, carboxyl transferase subunit beta; K01963 acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2] id=14629414 bin=bin8_Chloro species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin8_Chloro organism_group=Chloroflexi
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395}; Short=ACCase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; Short=Acetyl-CoA carboxylase carboxyltr
acetyl-CoA carboxylase carboxyl transferase subunit beta
13_1_40cm_3_scaffold_957_20
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

19291..20151
DNA (861bp) protein (287aa)
acetyl-CoA carboxylase, carboxyl transferase subunit alpha (EC:6.4.1.2)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UY58_ROSS1
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00176990}; Short=ACCase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; Short=
13_1_40cm_3_scaffold_957_21
Desulfurobacterium thermolithotrophum, Desulfurobacterium, Desulfurobacteriales, Aquificae, Aquificae, Bacteria

Not on your lists

20191..20622
DNA (432bp) protein (144aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160974}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160970};; TaxID=868864 species="Bacter
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Desulfurobacterium thermolithotrophum (strain DSM 11699 / BSA) RepID=F0S3F6_DESTD
D-tyrosyl-tRNA(Tyr) deacylase
13_1_40cm_3_scaffold_957_22
RBG_13_Chloroflexi_66_10_curated, Chloroflexi, Bacteria

Not on your lists

20615..21544
DNA (930bp) protein (310aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00036211CE
hypothetical protein Tax=RBG_13_Chloroflexi_66_10_curated
drug/metabolite transporter (DMT) superfamily permease
13_1_40cm_3_scaffold_957_23
Thermus sp. NMX2.A1, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

21541..22518
DNA (978bp) protein (326aa)
threonine dehydratase n=1 Tax=Thermus oshimai RepID=UPI00038009DD
threonine dehydratase
Threonine dehydratase {ECO:0000313|EMBL:ETN88379.1}; TaxID=570924 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.;" source="Thermus sp. NMX2.A1.;"
13_1_40cm_3_scaffold_957_24
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

22515..22982
DNA (468bp) protein (156aa)
CBS domain protein/ACT domain protein n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KZG8_THERP
hypothetical protein
CBS domain protein/ACT domain protein {ECO:0000313|EMBL:ACM05194.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium rose
13_1_40cm_3_scaffold_957_25
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

23032..24153
DNA (1122bp) protein (374aa)
Aminotransferase class I and II n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CEJ9_THET1
class I and II aminotransferase
Aminotransferase class I and II {ECO:0000313|EMBL:ACZ41355.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
13_1_40cm_3_scaffold_957_26
unknown

Not on your lists

24198..24602
DNA (405bp) protein (135aa)

This feature has no annotations

13_1_40cm_3_scaffold_957_27
Acetohalobium arabaticum, Acetohalobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24613..24993)
DNA (381bp) protein (127aa)
Putative uncharacterized protein n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QUL7_ACEAZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL13818.1}; TaxID=574087 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halobacteroidaceae; Acetohalobium.;" source="Acetohalobium arabaticum (s
13_1_40cm_3_scaffold_957_28
unknown

Not on your lists

25188..25328
DNA (141bp) protein (47aa)

This feature has no annotations

Displaying 28 items

View Taxonomy