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13_1_40cm_3_scaffold_167_20

Organism: 13_1_40CM_3_Chloroflexi_65_12

partial RP 32 / 55 MC: 2 BSCG 34 / 51 ASCG 9 / 38
Location: comp(12828..13406)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EEG4_9CHLR similarity UNIREF
DB: UNIREF100
  • Identity: 47.9
  • Coverage: 194.0
  • Bit_score: 170
  • Evalue 1.40e-39
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.9
  • Coverage: 194.0
  • Bit_score: 170
  • Evalue 1.90e-39
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 46.2
  • Coverage: 182.0
  • Bit_score: 165
  • Evalue 2.10e-38

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Taxonomy

Nitrolancea hollandica → Nitrolancea → Sphaerobacterales → Sphaerobacteridae → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 579
ATGGCGGAAAGTCCACCCCAAACTGCCTTCGCGGAAGAGGCATTGACACATCTCGACACGCTCTACCGGGGCGCGCTCCGGCTTACTCGCGACCCCGATTCGGCCCAGGACCTGGTCCAGGAGGCTTACCTCCGCGCGCTTCGCTACCAGCACAGCTACCAGCCGGGCACGAACATGAAGGCCTGGCTGTTCGCGATCATGCGCAATCTCTTCTGGGATCGGTTCAAGGGTTCCCGGAAGGAGGATGTCAGCCTCGACGACGTCGGCGAATTCGTCCTCTACGACAAGCTGCGCGACGAAGGCGCCAAACCTGAAGCCGATGTGCTGGACAAGCTGGCGGCGTCGGAGGTCGTGGCGGCTGTCGAGAAGCTACCTCCCCTGCACCGAGAGGTGGTGCTCCTGGTCGACGTGGAAGGCTTCTCCTACAGGGACGCCGCGCAGACCCTGGGGGTGCCCATCGGCACCGTCATGTCCCGGCTGCACCGTGCCCGCCAGCAGCTCCAGAAATCCCTCTATGACTACGCGTTGGAATCCGGTATCGTGCGCGCCAACGGCACCAAGGAGGTGCCAAACGAATGA
PROTEIN sequence
Length: 193
MAESPPQTAFAEEALTHLDTLYRGALRLTRDPDSAQDLVQEAYLRALRYQHSYQPGTNMKAWLFAIMRNLFWDRFKGSRKEDVSLDDVGEFVLYDKLRDEGAKPEADVLDKLAASEVVAAVEKLPPLHREVVLLVDVEGFSYRDAAQTLGVPIGTVMSRLHRARQQLQKSLYDYALESGIVRANGTKEVPNE*