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13_1_40cm_3_scaffold_6805

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_6805_1
Halanaerobium praevalens, Halanaerobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

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1..321
DNA (321bp) protein (107aa)
Elongation factor G n=1 Tax=Halanaerobium praevalens (strain ATCC 33744 / DSM 2228 / GSL) RepID=E3DPX3_HALPG
translation elongation factor 2 (EF-2/EF-G)
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=572479 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halanae
13_1_40cm_3_scaffold_6805_2
Geobacter bemidjiensis, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

350..1540
DNA (1191bp) protein (397aa)
Elongation factor Tu n=1 Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5EFP8_GEOBB rbh
tuf-2; elongation factor Tu
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=404380 species="Bacteria; Proteobacteria; Deltaproteobacter
13_1_40cm_3_scaffold_6805_3
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1560..1868
DNA (309bp) protein (103aa)
30S ribosomal protein S10 id=1841441 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
30S ribosomal protein S10; K02946 small subunit ribosomal protein S10 Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
30S ribosomal protein S10
13_1_40cm_3_scaffold_6805_4
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1871..2521
DNA (651bp) protein (217aa)
50S ribosomal protein L3; K02906 large subunit ribosomal protein L3 Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
50S ribosomal protein L3 id=1841443 bin=GWD2_Deltaproteobacteria_55_8 species=Desulfovibrio vulgaris genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
50S ribosomal protein L3P
13_1_40cm_3_scaffold_6805_5
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2518..3180
DNA (663bp) protein (221aa)
50S ribosomal protein L4 n=1 Tax=Thermodesulfatator atlanticus RepID=UPI0003B6AE99
rplD; 50S ribosomal protein L4; K02926 large subunit ribosomal protein L4 Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
50S ribosomal protein L4/L1e
13_1_40cm_3_scaffold_6805_6
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3177..3464
DNA (288bp) protein (96aa)
50S ribosomal protein L23 n=1 Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QKT0_DESB2
ribosomal protein L23 Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
ribosomal protein L25/L23
13_1_40cm_3_scaffold_6805_7
BJP_08E140C01_Clostridiales_46_19, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


3470..4294
DNA (825bp) protein (275aa)
50S ribosomal protein L2 n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6THE1_9CHLR
50S ribosomal protein L2
Tax=BJP_08E140C01_Clostridiales_46_19
13_1_40cm_3_scaffold_6805_8
Thermodesulfatator indicus, Thermodesulfatator, Thermodesulfobacteriales, Thermodesulfobacteria, Thermodesulfobacteria, Bacteria

Not on your lists


4673..4966
DNA (294bp) protein (98aa)
50S ribosomal protein L22 n=1 Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8AA42_THEID
50S ribosomal protein L22
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=667014 species="Bacteria; Thermodesulfobacteria; Thermodesulfobacteriales; Thermodesulfobacteriaceae;
13_1_40cm_3_scaffold_6805_9
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4968..5630
DNA (663bp) protein (221aa)
rpsC; 30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
30S ribosomal protein S3
30S ribosomal protein S3 id=4261414 bin=GWC2_Pelobacter_58_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
13_1_40cm_3_scaffold_6805_10
RLO_PLX_64_10, Bacteria

Not on your lists


5846..6019
DNA (174bp) protein (58aa)
50S ribosomal protein L16 n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6ZWL8_MELRP
rplP; putative 50S ribosomal protein L16; K02878 large subunit ribosomal protein L16 Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
50S ribosomal protein L16
13_1_40cm_3_scaffold_6805_11
Alicyclobacillus acidocaldarius, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


6054..6224
DNA (171bp) protein (57aa)
50S ribosomal protein L29 n=3 Tax=Alicyclobacillus acidocaldarius RepID=C8WTW5_ALIAD
rpmC; 50S ribosomal protein L29
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=543302 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicyclobacillus acidocal
13_1_40cm_3_scaffold_6805_12
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6221..6538
DNA (318bp) protein (106aa)
30S ribosomal protein S17 id=1815136 bin=GWB2_Deltaproteobacteria_65_81 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
rpsQ; 30S ribosomal protein S17; K02961 small subunit ribosomal protein S17 Tax=GWA2_Deltaproteobacteria_65_63_curated
30S ribosomal protein S17
13_1_40cm_3_scaffold_6805_13
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6542..6910
DNA (369bp) protein (123aa)
rplN; 50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
50S ribosomal protein L14 id=2042517 bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
rplN; 50S ribosomal protein L14
13_1_40cm_3_scaffold_6805_14
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6914..7240
DNA (327bp) protein (109aa)
50S ribosomal protein L24 id=2042516 bin=GWD2_Deltaproteobacteria_55_8 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
50S ribosomal protein L24; K02895 large subunit ribosomal protein L24 Tax=GWD2_Deltaproteobacteria_55_8_curated
50S ribosomal protein L24
13_1_40cm_3_scaffold_6805_15
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7243..7785
DNA (543bp) protein (181aa)
50S ribosomal protein L5 n=3 Tax=Anaeromyxobacter RepID=RL5_ANAD2
rplE; 50S ribosomal protein L5
50S ribosomal protein L5 {ECO:0000255|HAMAP-Rule:MF_01333}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter
13_1_40cm_3_scaffold_6805_16
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7799..7984
DNA (186bp) protein (62aa)
30S ribosomal protein S14 type Z n=1 Tax=uncultured bacterium RepID=K1YQC8_9BACT
rpsN; 30S ribosomal protein S14; K02954 small subunit ribosomal protein S14 Tax=GWD2_Deltaproteobacteria_55_8_curated
30S ribosomal protein S14 type Z
13_1_40cm_3_scaffold_6805_17
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7992..8387
DNA (396bp) protein (132aa)
30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
30S ribosomal protein S8 id=2042514 bin=GWD2_Deltaproteobacteria_55_8 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
30S ribosomal protein S8
13_1_40cm_3_scaffold_6805_18
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


8400..8948
DNA (549bp) protein (183aa)
rplF; 50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
50S ribosomal protein L6 id=2042512 bin=GWD2_Deltaproteobacteria_55_8 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
rplF; 50S ribosomal protein L6
13_1_40cm_3_scaffold_6805_19
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


8948..9313
DNA (366bp) protein (122aa)
50S ribosomal protein L18 n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=RL18_SORC5
rplR; 50S ribosomal protein L18; K02881 large subunit ribosomal protein L18 Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
rplR; 50S ribosomal protein L18
13_1_40cm_3_scaffold_6805_20
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


9326..9856
DNA (531bp) protein (177aa)
rpsE; 30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
30S ribosomal protein S5 id=2042508 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
30S ribosomal protein S5
13_1_40cm_3_scaffold_6805_21
Thermodesulfobacterium commune, Thermodesulfobacterium, Thermodesulfobacteriales, Thermodesulfobacteria, Thermodesulfobacteria, Bacteria

Not on your lists


9856..10038
DNA (183bp) protein (61aa)
50S ribosomal protein L30 n=1 Tax=Dermacoccus sp. Ellin185 RepID=E3BBH1_9MICO
50S ribosomal protein L30
50S ribosomal protein L30 {ECO:0000256|SAAS:SAAS00082687, ECO:0000313|EMBL:AIH04220.1}; TaxID=289377 species="Bacteria; Thermodesulfobacteria; Thermodesulfobacteriales; Thermodesulfobacteriaceae; Ther
13_1_40cm_3_scaffold_6805_22
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


10048..10503
DNA (456bp) protein (152aa)
50S ribosomal protein L15 n=2 Tax=Geobacter sulfurreducens RepID=RL15_GEOSL
rplO; 50S ribosomal protein L15
50S ribosomal protein L15 {ECO:0000255|HAMAP-Rule:MF_01341}; TaxID=243231 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sul
13_1_40cm_3_scaffold_6805_23
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


10496..11752
DNA (1257bp) protein (419aa)
Protein translocase subunit SecY n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LIL0_SYNFM
secY; preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
secY; preprotein translocase subunit SecY
13_1_40cm_3_scaffold_6805_24
Ferroglobus placidus, Ferroglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

11767..12399
DNA (633bp) protein (211aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00
Adenylate kinase n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3RXQ0_FERPA
adenylate kinase
13_1_40cm_3_scaffold_6805_25
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12396..13157
DNA (762bp) protein (254aa)
methionine aminopeptidase, type I (EC:3.4.11.18); K01265 methionyl aminopeptidase [EC:3.4.11.18] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase id=2042496 bin=GWD2_Deltaproteobacteria_55_8 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
13_1_40cm_3_scaffold_6805_26
BJP_IG2102_Coriobacteriales_64_17, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

13172..13387
DNA (216bp) protein (72aa)
translation initiation factor IF-1 n=1 Tax=Salsuginibacillus kocurii RepID=UPI00036580ED
translation initiation factor 1
Tax=BJP_IG2102_Coriobacteriales_64_17
13_1_40cm_3_scaffold_6805_27
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


13521..13904
DNA (384bp) protein (128aa)
rpsM; 30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
30S ribosomal protein S13 id=2042490 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
30S ribosomal protein S13
13_1_40cm_3_scaffold_6805_28
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


13914..14342
DNA (429bp) protein (143aa)
30S ribosomal protein S11; K02948 small subunit ribosomal protein S11 Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
30S ribosomal protein S11 id=2042487 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
30S ribosomal protein S11
13_1_40cm_3_scaffold_6805_29
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


14353..14979
DNA (627bp) protein (209aa)
30S ribosomal protein S4 n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=RS4_GEODF
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
rpsD; 30S ribosomal protein S4
13_1_40cm_3_scaffold_6805_30
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15005..16069
DNA (1065bp) protein (355aa)
DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
DNA-directed RNA polymerase subunit alpha n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=RPOA_SYNFM
DNA-directed RNA polymerase subunit alpha
Displaying items 1-30 of 36 in total

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