ggKbase home page

13_1_40cm_3_scaffold_9817_5

Organism: 13_1_40CM_3_Deltaproteobacteria_71_4

partial RP 25 / 55 BSCG 24 / 51 ASCG 2 / 38
Location: 5635..6372

Top 3 Functional Annotations

Value Algorithm Source
Sigma factor, ECF subfamily, putative n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08U01_STIAD similarity UNIREF
DB: UNIREF100
  • Identity: 37.5
  • Coverage: 216.0
  • Bit_score: 145
  • Evalue 7.80e-32
RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_16_Acidobacteria_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 46.0
  • Coverage: 189.0
  • Bit_score: 160
  • Evalue 2.50e-36
RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 41.8
  • Coverage: 182.0
  • Bit_score: 140
  • Evalue 5.40e-31

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Acidobacteria_68_9_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 738
ATGTCGGCCGCGGCCGCGACCTGGGCAGCCCCGCTACGTTCCCCTACAATGTGGCCGCCGATGGCGACCGTGCACGCCGACGAGCCGGCCCCGGAGAGCGCGGAAAGGCCCCGCGAGGCTCCTGCCGAGAGCGCTCCCGATGCGGGGGGCGCTTTTGCCGCCGCGGCCGCGGACCCGGACGTCGCGTTGATGCTCCGGTGCCAGAGCGGTGAGGAGGCGGCGTTCCAGGACCTCTTTCGGAAGTTCAGCCCGCGCGTCCTCCAGTTCGCTCGCCGGTTCGTCGGCAGCGAGGCCCGGGCCGAGGAAGTGACGCAGGACGTCTTCGTCCAGGTCTTCCGCTTCCGACATCGCTACCGTCCGCAGAGCCGCTTCTCCACCTGGTTGTACACGATCGCCACGAACCTCTGCCTGAACGAGGTGCGGCGTCCCGAGCGGCACCTTCGGGTCGACCTGTGGAATCGGCGCGACGGCGAGGAGCGTCCCGAAGGACCGCCCTTGCCCGACCCCGCCGCCGTGACGCCGGAAGAGGGTGCCGCGGCCCGGCAGCTCGGACAGCGGCTCGAAGCGCTCGTGGCGGAGCTGCCGCCGAAGCAACGGGCCGCCCTCTTGCTGTCCCGGGTGGACGGGCTGGCGTACCGCGACGTGGCCGAGGCGCTCGGCTCCACCGAAGGCGCCGTGAAGGCGCTTCTGTTCCGCGCCACCCAGACGCTCAAGCGGGGACTCCGAGACTATCTGTGA
PROTEIN sequence
Length: 246
MSAAAATWAAPLRSPTMWPPMATVHADEPAPESAERPREAPAESAPDAGGAFAAAAADPDVALMLRCQSGEEAAFQDLFRKFSPRVLQFARRFVGSEARAEEVTQDVFVQVFRFRHRYRPQSRFSTWLYTIATNLCLNEVRRPERHLRVDLWNRRDGEERPEGPPLPDPAAVTPEEGAAARQLGQRLEALVAELPPKQRAALLLSRVDGLAYRDVAEALGSTEGAVKALLFRATQTLKRGLRDYL*