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13_1_40cm_3_scaffold_9817

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_9817_1
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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2..523
DNA (522bp) protein (174aa)
phage SPO1 DNA polymerase-like protein; K02334 DNA polymerase bacteriophage-type [EC:2.7.7.7] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Phage SPO1 DNA polymerase-related protein id=2030601 bin=GWD2_Deltaproteobacteria_55_8 species=Anaeromyxobacter dehalogenans genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
phage SPO1 DNA polymerase-like protein
13_1_40cm_3_scaffold_9817_2
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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520..1812
DNA (1293bp) protein (431aa)
membrane-bound serine protease (ClpP class) Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Membrane-bound serine protease id=2586438 bin=GWC2_Methylomirabilis_70_16 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Nodulation efficiency protein NfeD
13_1_40cm_3_scaffold_9817_3
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(2610..3962)
DNA (1353bp) protein (451aa)
sigma-54-dependent transcriptional response regulator id=14626556 bin=bin7_NC10_sister species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
sigma-54-dependent transcriptional response regulator Tax=CSP1_6_Rokubacteria
Fis family transcriptional regulator
13_1_40cm_3_scaffold_9817_4

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comp(3964..5604)
DNA (1641bp) protein (547aa)
Two-component sensor kinase n=1 Tax=planctomycete KSU-1 RepID=I3IGL4_9PLAN
Marine sediment metagenome DNA, contig: S01H1_L06479 {ECO:0000313|EMBL:GAF76790.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
sensory box histidine kinase/response regulator
13_1_40cm_3_scaffold_9817_5
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

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5635..6372
DNA (738bp) protein (246aa)
Sigma factor, ECF subfamily, putative n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08U01_STIAD
RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_16_Acidobacteria_68_9_curated
RNA polymerase sigma-70 factor
13_1_40cm_3_scaffold_9817_6
unknown

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6384..6998
DNA (615bp) protein (205aa)

This feature has no annotations

13_1_40cm_3_scaffold_9817_7
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

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6995..7309
DNA (315bp) protein (105aa)
hypothetical protein Tax=RBG_16_Acidobacteria_68_9_curated
Uncharacterized protein id=4367554 bin=GWA2_Methylomirabilis_73_35 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_3_scaffold_9817_8
unknown

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9214..9324
DNA (111bp) protein (37aa)

This feature has no annotations

13_1_40cm_3_scaffold_9817_9
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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9512..11371
DNA (1860bp) protein (620aa)
UvrABC system protein C id=2147710 bin=GWD2_Deltaproteobacteria_55_8 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
uvrC; UvrABC system protein C; K03703 excinuclease ABC subunit C Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
uvrC; excinuclease ABC subunit C
13_1_40cm_3_scaffold_9817_10
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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11408..11845
DNA (438bp) protein (146aa)
DNA internalization-related competence protein ComEC/Rec2; K02238 competence protein ComEC Tax=RBG_16_Deltaproteobacteria_54_11_curated
Displaying 10 items

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