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13_1_40cm_3_scaffold_1311

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_1311_1
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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3..881
DNA (879bp) protein (293aa)
Cna B domain protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q025D2_SOLUE
CnaB domain-containing protein
Cna B domain protein {ECO:0000313|EMBL:ABJ83394.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="So
13_1_40cm_3_scaffold_1311_2

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comp(972..1364)
DNA (393bp) protein (131aa)
Marine sediment metagenome DNA, contig: S01H1_S13596 {ECO:0000313|EMBL:GAG07660.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
13_1_40cm_3_scaffold_1311_3
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(1383..3827)
DNA (2445bp) protein (815aa)
Uncharacterised conserved protein UCP016719 n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C9U6_9PLAN rbh
Uncharacterized protein {ECO:0000313|EMBL:CDM65440.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
13_1_40cm_3_scaffold_1311_4
unknown

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comp(3778..4404)
DNA (627bp) protein (209aa)

This feature has no annotations

13_1_40cm_3_scaffold_1311_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(4468..6369)
DNA (1902bp) protein (634aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" so
Glycoside hydrolase, family 3 domain protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q025V9_SOLUE
glycoside hydrolase family protein
13_1_40cm_3_scaffold_1311_6
RBG_19FT_COMBO_Aminicenantes_59_29_curated, Aminicenantes, Bacteria

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comp(6471..6767)
DNA (297bp) protein (99aa)
OmpR family response regulator; K07658 two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP id=24478560 bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
OmpR family response regulator; K07658 two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP Tax=RBG_19FT_COMBO_Aminicenantes_59_29_curated
two component transcriptional regulator
13_1_40cm_3_scaffold_1311_7
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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6891..8429
DNA (1539bp) protein (513aa)
DnaJ-class molecular chaperone with C-terminal Zn finger domain {ECO:0000313|EMBL:CDM66397.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrino
DnaJ-class molecular chaperone with C-terminal Zn finger domain id=2527131 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
hypothetical protein
13_1_40cm_3_scaffold_1311_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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8440..9129
DNA (690bp) protein (230aa)
HD-GYP domain protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LH12_CHLTF
HD-GYP domain-containing protein {ECO:0000313|EMBL:CDM66398.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
HD-GYP domain-containing protein
13_1_40cm_3_scaffold_1311_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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9320..10273
DNA (954bp) protein (318aa)
Uncharacterized protein {ECO:0000313|EMBL:CDM66399.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
13_1_40cm_3_scaffold_1311_10
R_PER_ii_49_16, PER-ii, Bacteria

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comp(10307..10621)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DX09_9BACT
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_PER_ii_49_16_curated
hypothetical protein
13_1_40cm_3_scaffold_1311_11
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(10918..11865)
DNA (948bp) protein (316aa)
Deacetylase, including histone deacetylase and acetoin utilization protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LIX7_CHLTF
Deacetylase, histone deacetylase/acetoin utilization protein {ECO:0000313|EMBL:CDM66400.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomon
deacetylase
13_1_40cm_3_scaffold_1311_12
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(11937..13421)
DNA (1485bp) protein (495aa)
TPR repeat-containing protein id=2146482 bin=GWB2_Deltaproteobacteria_65_81 species=Methanosaeta harundinacea genus=Methanosaeta taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
tetratricopeptide repeat protein Tax=GWA2_Deltaproteobacteria_65_63_curated
hypothetical protein
13_1_40cm_3_scaffold_1311_13
unknown

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13760..14005
DNA (246bp) protein (82aa)

This feature has no annotations

13_1_40cm_3_scaffold_1311_trna_1
unknown

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14167..14239
DNA (73bp)
transferRNA
13_1_40cm_3_scaffold_1311_14
unknown

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comp(14311..14391)
DNA (81bp) protein (27aa)

This feature has no annotations

Displaying 15 items

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