ggKbase home page

13_1_40cm_3_scaffold_19796

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_19796_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(185..1075)
DNA (891bp) protein (297aa)
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LI29_CHLTF rbh
ABC-type dipeptide/oligopeptide/nickel transport system, permease component {ECO:0000313|EMBL:CDM65333.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" so
dipeptide/oligopeptide/nickel ABC transporter permease
13_1_40cm_3_scaffold_19796_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(1077..2069)
DNA (993bp) protein (331aa)
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LE86_CHLTF
ABC-type dipeptide/oligopeptide/nickel transport system, permease component {ECO:0000313|EMBL:CDM65334.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" so
dipeptide/oligopeptide/nickel ABC transporter permease
13_1_40cm_3_scaffold_19796_3
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(2403..3122)
DNA (720bp) protein (240aa)
Demethylmenaquinone methyltransferase {ECO:0000256|HAMAP-Rule:MF_01813}; EC=2.1.1.163 {ECO:0000256|HAMAP-Rule:MF_01813};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Py
demethylmenaquinone methyltransferase (EC:2.1.1.-)
Demethylmenaquinone methyltransferase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01Q14_SOLUE
13_1_40cm_3_scaffold_19796_4
unknown

Not on your lists

comp(3175..3459)
DNA (285bp) protein (95aa)

This feature has no annotations

13_1_40cm_3_scaffold_19796_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(3459..4475)
DNA (1017bp) protein (339aa)
Insulinase-like:Peptidase M16 n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9P6Z1_9DELT
Predicted Zn-dependent peptidase {ECO:0000313|EMBL:CDM65241.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
13_1_40cm_3_scaffold_19796_6
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4799..5380
DNA (582bp) protein (194aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Ricinus communis RepID=B9TBS1_RICCO
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:KGF79542.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="M
Fis family transcriptional regulator
13_1_40cm_3_scaffold_19796_7
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

5400..7193
DNA (1794bp) protein (598aa)
TonB family C-terminal domain protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LH85_CHLTF
TonB family protein {ECO:0000313|EMBL:CDM65243.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
TonB family C-terminal domain-containing protein
13_1_40cm_3_scaffold_19796_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(7387..8586)
DNA (1200bp) protein (400aa)
Aspartate/tyrosine/aromatic aminotransferase {ECO:0000313|EMBL:CDM65244.1}; EC=2.6.1.1 {ECO:0000313|EMBL:CDM65244.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrin
L-aspartate aminotransferase (EC:2.6.1.1)
L-aspartate aminotransferase apoenzyme n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LDP4_CHLTF rbh
13_1_40cm_3_scaffold_19796_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(8583..9071)
DNA (489bp) protein (163aa)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyr
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00037DCA17
phosphopantetheine adenylyltransferase
13_1_40cm_3_scaffold_19796_10
RLO_PLX_64_10, Bacteria

Not on your lists

9181..9789
DNA (609bp) protein (203aa)
hypothetical protein n=1 Tax=Scytonema hofmanni RepID=UPI0003486E98
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
hypothetical protein
13_1_40cm_3_scaffold_19796_11
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

9974..10633
DNA (660bp) protein (220aa)
Methionine synthase (B12-dependent) {ECO:0000313|EMBL:CDM65295.1}; EC=2.1.1.13 {ECO:0000313|EMBL:CDM65295.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;
metH; methionine synthase (EC:2.1.1.13)
Methionine synthase n=1 Tax=Synechococcus sp. (strain JA-3-3Ab) RepID=Q2JS51_SYNJA
Displaying 11 items

View Taxonomy