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13_1_40cm_3_scaffold_2161

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_2161_1
unknown

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3..209
DNA (207bp) protein (69aa)

This feature has no annotations

13_1_40cm_3_scaffold_2161_2
unknown

Not on your lists

comp(500..820)
DNA (321bp) protein (107aa)

This feature has no annotations

13_1_40cm_3_scaffold_2161_3
unknown

Not on your lists

1097..1552
DNA (456bp) protein (152aa)

This feature has no annotations

13_1_40cm_3_scaffold_2161_4
Desulfomonile tiedjei, Desulfomonile, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1706..2068)
DNA (363bp) protein (121aa)
PAS domain S-box {ECO:0000313|EMBL:AFM26206.1}; TaxID=706587 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfomonile.;" source="Desulfomonile tiedjei
13_1_40cm_3_scaffold_2161_5
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(2216..2992)
DNA (777bp) protein (259aa)
hypothetical protein n=1 Tax=Scytonema hofmanni RepID=UPI00034A1AC6
Crp/Fnr family transcriptional regulator {ECO:0000313|EMBL:KIF18523.1}; TaxID=1245923 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
CarD family transcriptional regulator
13_1_40cm_3_scaffold_2161_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

3337..3855
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI000376710F
Response regulator containing a CheY-like receiver domain and a GGDEF domain {ECO:0000313|EMBL:CDM66616.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" s
PAS domain-containing protein
13_1_40cm_3_scaffold_2161_7
CG_Nitrosp_02, Nitrospirae, Bacteria

Not on your lists

4049..4519
DNA (471bp) protein (157aa)
Putative two-component hybrid sensor and regulator n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0HZR7_CALAS
two-component response regulator Tax=CG_Nitrosp_02
putative two-component hybrid sensor and regulator
13_1_40cm_3_scaffold_2161_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(4709..5191)
DNA (483bp) protein (161aa)
Transport-associated n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JHD9_ANAD2
Predicted integral membrane protein {ECO:0000313|EMBL:CDM66433.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
transport-associated protein
13_1_40cm_3_scaffold_2161_9
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5277..5474)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Rhizobium lupini HPC(L) RepID=K5D6K1_RHILU
DNA, contig: SP643 {ECO:0000313|EMBL:GAN14580.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
hypothetical protein
13_1_40cm_3_scaffold_2161_10
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5495..10297)
DNA (4803bp) protein (1601aa)
ATP-dependent DNA helicase n=1 Tax=Methylosinus sp. LW4 RepID=UPI000381915D
ATP-dependent DNA helicase {ECO:0000313|EMBL:EYR68324.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter caps
DEAD/DEAH box helicase
13_1_40cm_3_scaffold_2161_11
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

10675..11676
DNA (1002bp) protein (334aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01WD4_SOLUE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ86031.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatu
13_1_40cm_3_scaffold_2161_12
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

11794..12798
DNA (1005bp) protein (335aa)
ATP dependent DNA ligase n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B2A077_OPITP rbh
ligC; ATP-dependent DNA ligase
ATP dependent DNA ligase {ECO:0000313|EMBL:ACB77413.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90
13_1_40cm_3_scaffold_2161_13
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(12868..13674)
DNA (807bp) protein (269aa)
TonB family C-terminal domain protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LGE2_CHLTF
TonB family protein {ECO:0000313|EMBL:CDM64995.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
TonB family C-terminal domain-containing protein
13_1_40cm_3_scaffold_2161_14

Not on your lists

13928..15283
DNA (1356bp) protein (452aa)
NAD-specific glutamate dehydrogenase n=1 Tax=mine drainage metagenome RepID=T1BJB3_9ZZZZ
Glutamate/Leucine/Phenylalanine/Valine dehydrogenase {ECO:0000313|EMBL:AIA18742.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Glu/Leu/Phe/Val dehydrogenase
13_1_40cm_3_scaffold_2161_15
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

15398..15610
DNA (213bp) protein (71aa)
putative arsenate reductase (EC:1.20.4.1); K00537 arsenate reductase [EC:1.20.4.1] Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
arsenate reductase n=1 Tax=Microbulbifer agarilyticus RepID=UPI0002557F1E
arsenate reductase
13_1_40cm_3_scaffold_2161_16
unknown

Not on your lists

15607..15693
DNA (87bp) protein (29aa)

This feature has no annotations

Displaying 16 items

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