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13_1_40cm_3_scaffold_2435

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_2435_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(1..669)
DNA (669bp) protein (223aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952, ECO:0000256|RuleBase:RU000518};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=45419
DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase 1 n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LH23_CHLTF
13_1_40cm_3_scaffold_2435_2
R_OD1_Falkowbacteria_56_16, Falkowbacteria, Parcubacteria, Bacteria

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comp(670..999)
DNA (330bp) protein (110aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-N16 RepID=UPI0003B3D0ED
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_56_16_curated
hypothetical protein
13_1_40cm_3_scaffold_2435_3
R_KAZAN_48_13, Kazan, Bacteria

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comp(1057..1401)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1Z527_9BACT
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_KAZAN_48_13_curated
hypothetical protein
13_1_40cm_3_scaffold_2435_4
unknown

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1610..2140
DNA (531bp) protein (177aa)

This feature has no annotations

13_1_40cm_3_scaffold_2435_5
R_Deltaproteobacteria_43_9, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2246..3274)
DNA (1029bp) protein (343aa)
Alcohol dehydrogenase, zinc-binding domain protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MK52_9BACT id=5224712 bin=16ft_combo_ws3_JS1 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
alcohol dehydrogenase Tax=RIFCSPHIGHO2_12_FULL_Deltaproteobacteria_43_9_curated
alcohol dehydrogenase
13_1_40cm_3_scaffold_2435_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(3327..3866)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VQL6_METIM
Predicted membrane protein {ECO:0000313|EMBL:CDM64564.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
13_1_40cm_3_scaffold_2435_7
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(3962..5011)
DNA (1050bp) protein (350aa)
d-fructose 1,6-bisphosphatase (EC:3.1.3.11)
Fructose-1,6-bisphosphatase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LDD5_CHLTF rbh
Fructose-1,6-bisphosphatase {ECO:0000256|PIRNR:PIRNR004532}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
13_1_40cm_3_scaffold_2435_8
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5311..5604
DNA (294bp) protein (98aa)
type 12 methyltransferase Tax=RBG_16_Anaeromyxobacter_69_14_curated
type 12 methyltransferase
methyltransferase type 12 id=109853 bin=ACD73 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=ACD73 organism_group=Proteobacteria organism_desc=Unknown
13_1_40cm_3_scaffold_2435_9
CG_Deferri_01, Deferribacterales, Deferribacteres, Deferribacteres, Bacteria

Not on your lists

5582..5995
DNA (414bp) protein (138aa)
cetoacetate metabolism regulatory protein atoC n=1 Tax=Schlesneria paludicola RepID=UPI00029A8256
Fis family transcriptional regulator Tax=CG_Deferri_01
Fis family transcriptional regulator
13_1_40cm_3_scaffold_2435_10
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(6032..7261)
DNA (1230bp) protein (410aa)
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:CDM64566.1}; EC=1.3.99.32 {ECO:0000313|EMBL:CDM64566.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Py
acyl-CoA dehydrogenase domain-containing protein id=24458148 bin=RBG_19FT_COMBO_GAL15_69_19 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
acyl-CoA dehydrogenase domain protein
13_1_40cm_3_scaffold_2435_11
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(7305..8933)
DNA (1629bp) protein (543aa)
Xylan 1,4-beta-xylosidase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TEV3_NIAKG rbh
Beta-xylosidase {ECO:0000313|EMBL:CDM64033.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
xylan 1,4-beta-xylosidase
13_1_40cm_3_scaffold_2435_12
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(8990..9916)
DNA (927bp) protein (309aa)
C-terminal processing peptidase {ECO:0000313|EMBL:CDM66918.1}; EC=3.4.21.102 {ECO:0000313|EMBL:CDM66918.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;"
C-terminal peptidase (prc) (EC:3.4.21.102)
C-terminal peptidase (Prc) n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LH65_CHLTF
Displaying 12 items

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