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13_1_40cm_3_scaffold_4578

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_4578_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

255..1946
DNA (1692bp) protein (564aa)
N-acyl-D-aspartate/D-glutamate deacylase {ECO:0000313|EMBL:CDM64581.1}; EC=3.5.1.81 {ECO:0000313|EMBL:CDM64581.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomo
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJW4_KORVE
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
13_1_40cm_3_scaffold_4578_2
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

comp(2114..2899)
DNA (786bp) protein (262aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI0003687988
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
hypothetical protein
13_1_40cm_3_scaffold_4578_3
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(3142..6666)
DNA (3525bp) protein (1175aa)
hypothetical membrane protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical membrane protein id=12556779 bin=CNBR_ACIDO species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical membrane protein
13_1_40cm_3_scaffold_4578_4
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(6764..8122)
DNA (1359bp) protein (453aa)
hypothetical membrane protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hypothetical membrane protein id=12556782 bin=CNBR_ACIDO species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
double-transmembrane region domain protein
13_1_40cm_3_scaffold_4578_5
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(8152..8763)
DNA (612bp) protein (204aa)
hypothetical membrane protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hypothetical membrane protein id=12556782 bin=CNBR_ACIDO species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical membrane protein
13_1_40cm_3_scaffold_4578_6
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(8913..9872)
DNA (960bp) protein (320aa)
hypothetical protein n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B441C9
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hypothetical protein
13_1_40cm_3_scaffold_4578_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(10012..11031)
DNA (1020bp) protein (340aa)
hypothetical protein; K03924 MoxR-like ATPase [EC:3.6.3.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ATPase AAA n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B53A48
hypothetical protein
13_1_40cm_3_scaffold_4578_8
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(11236..13791)
DNA (2556bp) protein (852aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ACB4_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
hypothetical protein
13_1_40cm_3_scaffold_4578_9
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(13977..15179)
DNA (1203bp) protein (401aa)
signal peptide prediction Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
signal peptide prediction id=12555378 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
signal peptide prediction
13_1_40cm_3_scaffold_4578_10
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(15176..17479)
DNA (2304bp) protein (768aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ACB2_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
protein of unknown function DUF1355
13_1_40cm_3_scaffold_4578_trna_1
unknown

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comp(17695..17777)
DNA (83bp)
transferRNA
13_1_40cm_3_scaffold_4578_11
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

17928..19118
DNA (1191bp) protein (397aa)
membrane protein n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002628DBE
Protease prsW family
Protease prsW family {ECO:0000313|EMBL:AHY46115.1}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacte
13_1_40cm_3_scaffold_4578_12
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

19335..20111
DNA (777bp) protein (259aa)
Metal-dependent hydrolase, beta-lactamase superfamily III n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DER2_SINAD
Low-affinity cAMP phosphodiesterase
Low-affinity cAMP phosphodiesterase {ECO:0000313|EMBL:AEP13817.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermo
Displaying 13 items

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