ggKbase home page

13_1_40cm_3_scaffold_6607

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_6607_1
unknown

Not on your lists

198..1796
DNA (1599bp) protein (533aa)

This feature has no annotations

13_1_40cm_3_scaffold_6607_2
Arthrospira platensis, Arthrospira, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

1793..3100
DNA (1308bp) protein (436aa)
Predicted protein n=1 Tax=Nematostella vectensis RepID=A7T5N6_NEMVE
TPR domain protein
TPR domain protein {ECO:0000313|EMBL:BAI89922.1}; TaxID=696747 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Arthrospira.;" source="Arthrospira platensis (strain NIES-39 /
13_1_40cm_3_scaffold_6607_3
Nostoc sp. PCC 7524, Nostoc, Nostocales, Cyanobacteria, Bacteria

Not on your lists

3063..4853
DNA (1791bp) protein (597aa)
Uncharacterized protein n=1 Tax=Nostoc sp. (strain ATCC 29411 / PCC 7524) RepID=K9QXW0_NOSS7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY49632.1}; Flags: Precursor;; TaxID=28072 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc sp. (strain ATCC 29411 / PCC 7
13_1_40cm_3_scaffold_6607_4
unknown

Not on your lists

comp(4865..5626)
DNA (762bp) protein (254aa)

This feature has no annotations

13_1_40cm_3_scaffold_6607_5
unknown

Not on your lists

comp(5688..6272)
DNA (585bp) protein (195aa)

This feature has no annotations

13_1_40cm_3_scaffold_6607_6
unknown

Not on your lists

comp(6841..7326)
DNA (486bp) protein (162aa)

This feature has no annotations

13_1_40cm_3_scaffold_6607_7
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(7481..8536)
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T6N9_NIAKG
Uncharacterized photosystem II stability/assembly factor-like protein {ECO:0000313|EMBL:CDM65906.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="
hypothetical protein
13_1_40cm_3_scaffold_6607_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(8573..9436)
DNA (864bp) protein (288aa)
Polysaccharide export protein n=1 Tax=Phaeospirillum fulvum MGU-K5 RepID=S9SCS3_PHAFV
Periplasmic protein involved in polysaccharide export {ECO:0000313|EMBL:CDM65907.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas meth
polysaccharide biosynthesis/export protein
13_1_40cm_3_scaffold_6607_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(9538..10863)
DNA (1326bp) protein (442aa)
Sugar transferase, PEP-CTERM system associated/exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase {ECO:0000313|EMBL:CDM65908.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidob
sugar transferase id=12557446 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
sugar transferase
13_1_40cm_3_scaffold_6607_10
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(10990..11913)
DNA (924bp) protein (308aa)
capsular polysaccharide biosynthesis protein (EC:2.7.10.1)
Capsular exopolysaccharide family protein n=1 Tax=Bacillus nealsonii AAU1 RepID=R9C7Z2_9BACI
Capsular exopolysaccharide biosynthesis protein {ECO:0000313|EMBL:CDM65909.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylalip
13_1_40cm_3_scaffold_6607_11
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(12007..13152)
DNA (1146bp) protein (382aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003750722
Type II secretory pathway, component ExeA (Predicted ATPase) {ECO:0000313|EMBL:CDM65910.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomon
general secretion pathway protein-like protein
13_1_40cm_3_scaffold_6607_12
unknown

Not on your lists

comp(13201..13335)
DNA (135bp) protein (45aa)

This feature has no annotations

13_1_40cm_3_scaffold_6607_13
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(13469..14464)
DNA (996bp) protein (332aa)
hypothetical protein n=1 Tax=Methylomicrobium buryatense RepID=UPI0003489535
Uncharacterized protein involved in exopolysaccharide biosynthesis {ECO:0000313|EMBL:CDM65911.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyr
polysaccharide chain length determinant protein
13_1_40cm_3_scaffold_6607_14
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(14416..14958)
DNA (543bp) protein (181aa)
gumC1; protein GumC1 (EC:2.7.10.1)
Uncharacterized protein involved in exopolysaccharide biosynthesis {ECO:0000313|EMBL:CDM65911.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyr
Putative uncharacterized protein id=3866436 bin=GWC2_Deltaproteobacteria_66_88 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
Displaying 14 items

View Taxonomy