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13_1_40cm_3_scaffold_1108

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_1108_1
unknown

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1..195
DNA (195bp) protein (65aa)

This feature has no annotations

13_1_40cm_3_scaffold_1108_2
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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192..1292
DNA (1101bp) protein (367aa)
Hypothetical conserved protein n=1 Tax=uncultured prokaryote RepID=H5SCL4_9ZZZZ
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein
13_1_40cm_3_scaffold_1108_3
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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1632..2066
DNA (435bp) protein (145aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_3_scaffold_1108_4
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

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2243..3241
DNA (999bp) protein (333aa)
Putative uncharacterized protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q8S8_CATAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU70343.1}; Flags: Precursor;; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora ac
13_1_40cm_3_scaffold_1108_5
unknown

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3231..4391
DNA (1161bp) protein (387aa)

This feature has no annotations

13_1_40cm_3_scaffold_1108_6
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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comp(5948..6109)
DNA (162bp) protein (54aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_3_scaffold_1108_7
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

6191..7180
DNA (990bp) protein (330aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1); K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase id=4803694 bin=GWC2_Chloroflexi_73_18 species=Dehalogenimonas lykanthroporepellens genus=Dehalogenimonas taxon_order=unknown taxon_class=Dehalococcoidia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
13_1_40cm_3_scaffold_1108_8
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

7192..9786
DNA (2595bp) protein (865aa)
Protein translocase subunit SecA n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KY62_THERP rbh
protein translocase subunit secA; K03070 preprotein translocase subunit SecA Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
secA; Preprotein translocase subunit SecA
13_1_40cm_3_scaffold_1108_9
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

9811..10611
DNA (801bp) protein (267aa)
prolipoprotein diacylglyceryl transferase; K13292 phosphatidylglycerol:prolipoprotein diacylglycerol transferase [EC:2.-.-.-] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
lgt; prolipoprotein diacylglyceryl transferase (EC:2.4.99.-)
Prolipoprotein diacylglyceryl transferase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C8C4_SPHTD
13_1_40cm_3_scaffold_1108_10
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

10572..11417
DNA (846bp) protein (282aa)
prolipoprotein diacylglyceryl transferase; K13292 phosphatidylglycerol:prolipoprotein diacylglycerol transferase [EC:2.-.-.-] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
lgt; prolipoprotein diacylglyceryl transferase (EC:2.4.99.-)
Prolipoprotein diacylglyceryl transferase n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L4S3_THERP
13_1_40cm_3_scaffold_1108_11
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

11438..12349
DNA (912bp) protein (304aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00035F8DDF
NAD-dependent epimerase/dehydratase Tax=RBG_16_RIF_CHLX_69_14_curated
putative nucleoside-diphosphate sugar epimerase
13_1_40cm_3_scaffold_1108_12
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

12522..12719
DNA (198bp) protein (66aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_3_scaffold_1108_13
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

13096..13848
DNA (753bp) protein (251aa)
peptide chain release factor 2; K02836 peptide chain release factor 2 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Peptide chain release factor 2 id=4803703 bin=GWC2_Chloroflexi_73_18 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
peptide chain release factor 2
13_1_40cm_3_scaffold_1108_14
unknown

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13885..14223
DNA (339bp) protein (113aa)

This feature has no annotations

13_1_40cm_3_scaffold_1108_15
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(14220..15575)
DNA (1356bp) protein (452aa)
Putative domain HDIG-containing protein id=4952081 bin=GWC2_Chloroflexi_73_18 species=Spirochaeta thermophila genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good + rbh
polynucleotide adenylyltransferase/metal dependent phosphohydrolase Tax=GWC2_RIF_CHLX_73_18_curated
polynucleotide adenylyltransferase/metal dependent phosphohydrolase
13_1_40cm_3_scaffold_1108_16
Arthrobacter sp. PAMC25486, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15599..16309)
DNA (711bp) protein (237aa)
amino acid ABC transporter ATPase n=1 Tax=Arthrobacter sp. 162MFSha1.1 RepID=UPI00036940A4
putative branched-chain amino acid transport, ATP-binding protein
Putative branched-chain amino acid transport, ATP-binding protein {ECO:0000313|EMBL:AIY03471.1}; TaxID=1494608 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source=
13_1_40cm_3_scaffold_1108_17
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

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comp(16315..16896)
DNA (582bp) protein (194aa)
ABC tranpsorter, permease protein (N-ter) and ATP-binding protein (C-ter) putative branched-chain amino acid transport protein id=3788281 bin=GWC2_Nitrospirae_57_13 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
branched-chain amino acid ABC transporter permease/ATP-binding protein Tax=GWC2_Nitrospirae_57_13_curated
livG; leucine/isoleucine/valine transporter subunit ; ATP-binding component of ABC superfamily
13_1_40cm_3_scaffold_1108_18
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(17077..17664)
DNA (588bp) protein (196aa)
Inner-membrane translocator n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B4R9_HERA2
inner-membrane translocator
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Displaying 18 items

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