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13_1_40cm_3_scaffold_26757

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_26757_1
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists


comp(1..489)
DNA (489bp) protein (163aa)
30S ribosomal protein S4 n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9RZN9_THEOJ
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
30S ribosomal protein S4
13_1_40cm_3_scaffold_26757_2
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists


comp(489..1004)
DNA (516bp) protein (172aa)
30S ribosomal protein S11 n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=RS11_HERA2
30S ribosomal protein S11; K02948 small subunit ribosomal protein S11 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
30S ribosomal protein S11
13_1_40cm_3_scaffold_26757_3
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists


comp(1004..1387)
DNA (384bp) protein (128aa)
rpsM; 30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
rpsM; 30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 id=14629525 bin=bin8_Chloro species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
30S ribosomal protein S13
13_1_40cm_3_scaffold_26757_4
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(1395..1508)
DNA (114bp) protein (38aa)
50S ribosomal protein L36 n=6 Tax=Chroococcales RepID=RL36_SYNPX
rpmJ, rpl36; 50S ribosomal protein L36; K02919 large subunit ribosomal protein L36 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
rpmJ; 50S ribosomal protein L36
13_1_40cm_3_scaffold_26757_5
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(1566..1799)
DNA (234bp) protein (78aa)
Translation initiation factor IF-1 n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CWN3_9CLOT
Translation initiation factor IF-1; K02518 translation initiation factor IF-1 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
translation initiation factor IF-1
13_1_40cm_3_scaffold_26757_6
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(1896..2675)
DNA (780bp) protein (260aa)
methionine aminopeptidase; K01265 methionyl aminopeptidase [EC:3.4.11.18] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
methionine aminopeptidase (EC:3.4.11.18)
methionine aminopeptidase n=1 Tax=Alicyclobacillus pohliae RepID=UPI00037DAA45
13_1_40cm_3_scaffold_26757_7
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(2672..3202)
DNA (531bp) protein (177aa)
adk; adenylate kinase (EC:2.7.4.3); K00939 adenylate kinase [EC:2.7.4.3] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Adenylate kinase n=1 Tax=Thermus thermophilus (strain SG0.5JP17-16) RepID=F6DEN1_THETG
adenylate kinase
13_1_40cm_3_scaffold_26757_8
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

3766..4044
DNA (279bp) protein (93aa)
Tax=RBG_16_Actinobacteria_68_12_curated
13_1_40cm_3_scaffold_26757_9
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

4072..4254
DNA (183bp) protein (61aa)
Tax=RBG_16_RIF_CHLX_69_14_curated
13_1_40cm_3_scaffold_26757_10
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

4261..4536
DNA (276bp) protein (92aa)
hypothetical protein Tax=RBG_16_RIF_CHLX_69_14_curated
13_1_40cm_3_scaffold_26757_11
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists


comp(4666..5112)
DNA (447bp) protein (149aa)
50S ribosomal protein L15; K02876 large subunit ribosomal protein L15 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
50S ribosomal protein L15 id=4362167 bin=GWC2_Chloroflexi_73_18 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
50S ribosomal protein L15
13_1_40cm_3_scaffold_26757_12
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists


comp(5112..5312)
DNA (201bp) protein (67aa)
50S ribosomal protein L30 n=1 Tax=Prevotella marshii DSM 16973 RepID=E0NVF7_9BACT
rpmD; 50S ribosomal protein L30; K02907 large subunit ribosomal protein L30 Tax=RBG_16_Chloroflexi_68_14_curated
rpmD; 50S ribosomal protein L30
13_1_40cm_3_scaffold_26757_13
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists


comp(5309..5818)
DNA (510bp) protein (170aa)
rpsE; 30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
rpsE; 30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 id=14629533 bin=bin8_Chloro species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
30S ribosomal protein S5
13_1_40cm_3_scaffold_26757_14
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(5862..6215)
DNA (354bp) protein (118aa)
50S ribosomal protein L18 n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SKY4_THEM7
50S ribosomal protein L18
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=644966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source
13_1_40cm_3_scaffold_26757_15
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists


comp(6219..6656)
DNA (438bp) protein (146aa)
50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 id=14629535 bin=bin8_Chloro species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
rplF; 50S ribosomal protein L6
13_1_40cm_3_scaffold_26757_16
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists


comp(6740..7237)
DNA (498bp) protein (166aa)
30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
30S ribosomal protein S8 id=4362160 bin=GWC2_Chloroflexi_73_18 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
SSU ribosomal protein S8P
13_1_40cm_3_scaffold_26757_17
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists


comp(7242..7427)
DNA (186bp) protein (62aa)
30S ribosomal protein S14 type Z n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6THD1_9CHLR
30S ribosomal protein S14 type Z {ECO:0000256|HAMAP-Rule:MF_01364, ECO:0000256|SAAS:SAAS00014984}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae;
rpsN; 30S ribosomal protein S14
13_1_40cm_3_scaffold_26757_18
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists


comp(7438..7986)
DNA (549bp) protein (183aa)
50S ribosomal protein L5 n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=RL5_SYMTH
rplE; 50S ribosomal protein L5 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
rplE; 50S ribosomal protein L5
13_1_40cm_3_scaffold_26757_19
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists


comp(7986..8327)
DNA (342bp) protein (114aa)
50S ribosomal protein L24 n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=RL24_CARHZ
rplX; 50S ribosomal protein L24; K02895 large subunit ribosomal protein L24 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
rplX; 50S ribosomal protein L24
13_1_40cm_3_scaffold_26757_20
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists


comp(8330..8698)
DNA (369bp) protein (123aa)
50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
50S ribosomal protein L14 id=4362127 bin=GWC2_Chloroflexi_73_18 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
50S ribosomal protein L14
Displaying 20 items

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